Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PKNOX1P55347 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PKNOX1P55347 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PKNOX1P55347 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.87■□□□□ 0.77
PKNOX1P55347 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.87■□□□□ 0.77
PKNOX1P55347 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PKNOX1P55347 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PKNOX1P55347 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.87■□□□□ 0.77
PKNOX1P55347 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.87■□□□□ 0.77
PKNOX1P55347 MIR2861-201ENST00000636310 90 ntBASIC19.87■□□□□ 0.77
PKNOX1P55347 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.87■□□□□ 0.77
PKNOX1P55347 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.87■□□□□ 0.77
PKNOX1P55347 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PKNOX1P55347 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.86■□□□□ 0.77
PKNOX1P55347 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.86■□□□□ 0.77
PKNOX1P55347 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PKNOX1P55347 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PKNOX1P55347 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKNOX1P55347 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKNOX1P55347 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKNOX1P55347 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.86■□□□□ 0.77
PKNOX1P55347 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.86■□□□□ 0.77
PKNOX1P55347 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.86■□□□□ 0.77
PKNOX1P55347 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.86■□□□□ 0.77
PKNOX1P55347 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.86■□□□□ 0.77
PKNOX1P55347 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKNOX1P55347 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PKNOX1P55347 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PKNOX1P55347 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PKNOX1P55347 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
PKNOX1P55347 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PKNOX1P55347 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKNOX1P55347 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.85■□□□□ 0.77
PKNOX1P55347 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKNOX1P55347 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKNOX1P55347 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PKNOX1P55347 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PKNOX1P55347 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.85■□□□□ 0.77
PKNOX1P55347 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKNOX1P55347 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKNOX1P55347 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKNOX1P55347 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKNOX1P55347 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKNOX1P55347 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.85■□□□□ 0.77
PKNOX1P55347 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.85■□□□□ 0.77
PKNOX1P55347 AC243732.1-201ENST00000612648 864 ntBASIC19.85■□□□□ 0.77
PKNOX1P55347 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKNOX1P55347 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKNOX1P55347 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKNOX1P55347 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PKNOX1P55347 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PKNOX1P55347 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKNOX1P55347 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PKNOX1P55347 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKNOX1P55347 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.84■□□□□ 0.77
PKNOX1P55347 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PKNOX1P55347 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PKNOX1P55347 SLC7A5P1-201ENST00000568957 537 ntBASIC19.84■□□□□ 0.77
PKNOX1P55347 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PKNOX1P55347 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKNOX1P55347 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PKNOX1P55347 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PKNOX1P55347 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKNOX1P55347 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKNOX1P55347 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
PKNOX1P55347 AC099778.1-201ENST00000568593 1911 ntBASIC19.84■□□□□ 0.77
PKNOX1P55347 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKNOX1P55347 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.84■□□□□ 0.77
PKNOX1P55347 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKNOX1P55347 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.83■□□□□ 0.77
PKNOX1P55347 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PKNOX1P55347 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PKNOX1P55347 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.83■□□□□ 0.77
PKNOX1P55347 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.83■□□□□ 0.77
PKNOX1P55347 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.83■□□□□ 0.77
PKNOX1P55347 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PKNOX1P55347 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PKNOX1P55347 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PKNOX1P55347 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PKNOX1P55347 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PKNOX1P55347 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PKNOX1P55347 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.83■□□□□ 0.77
PKNOX1P55347 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.83■□□□□ 0.77
PKNOX1P55347 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.83■□□□□ 0.77
PKNOX1P55347 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms