Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXG1P55316 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXG1P55316 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.84■□□□□ 0.45
FOXG1P55316 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXG1P55316 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXG1P55316 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
FOXG1P55316 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXG1P55316 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXG1P55316 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXG1P55316 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXG1P55316 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXG1P55316 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.84■□□□□ 0.45
FOXG1P55316 CD99P1-205ENST00000527459 561 ntBASIC17.84■□□□□ 0.45
FOXG1P55316 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXG1P55316 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
FOXG1P55316 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
FOXG1P55316 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXG1P55316 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXG1P55316 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
FOXG1P55316 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXG1P55316 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXG1P55316 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXG1P55316 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXG1P55316 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXG1P55316 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.83■□□□□ 0.45
FOXG1P55316 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
FOXG1P55316 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
FOXG1P55316 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.83■□□□□ 0.45
FOXG1P55316 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
FOXG1P55316 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXG1P55316 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.83■□□□□ 0.44
FOXG1P55316 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FOXG1P55316 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.83■□□□□ 0.44
FOXG1P55316 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.83■□□□□ 0.44
FOXG1P55316 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.83■□□□□ 0.44
FOXG1P55316 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
FOXG1P55316 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.82■□□□□ 0.44
FOXG1P55316 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
FOXG1P55316 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXG1P55316 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXG1P55316 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
FOXG1P55316 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.82■□□□□ 0.44
FOXG1P55316 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.82■□□□□ 0.44
FOXG1P55316 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
FOXG1P55316 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.82■□□□□ 0.44
FOXG1P55316 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXG1P55316 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXG1P55316 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.82■□□□□ 0.44
FOXG1P55316 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.82■□□□□ 0.44
FOXG1P55316 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXG1P55316 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXG1P55316 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXG1P55316 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXG1P55316 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXG1P55316 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
FOXG1P55316 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
FOXG1P55316 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXG1P55316 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXG1P55316 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
FOXG1P55316 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXG1P55316 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXG1P55316 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXG1P55316 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.81■□□□□ 0.44
FOXG1P55316 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.81■□□□□ 0.44
FOXG1P55316 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
FOXG1P55316 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXG1P55316 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXG1P55316 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.81■□□□□ 0.44
FOXG1P55316 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.81■□□□□ 0.44
FOXG1P55316 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
FOXG1P55316 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
FOXG1P55316 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
FOXG1P55316 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.8■□□□□ 0.44
FOXG1P55316 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXG1P55316 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
FOXG1P55316 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
FOXG1P55316 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXG1P55316 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.8■□□□□ 0.44
FOXG1P55316 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
FOXG1P55316 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.8■□□□□ 0.44
FOXG1P55316 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXG1P55316 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.8■□□□□ 0.44
FOXG1P55316 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
FOXG1P55316 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms