Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ITGA8P53708 AC116562.4-201ENST00000641316 2276 ntBASIC20.82■□□□□ 0.92
ITGA8P53708 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.82■□□□□ 0.92
ITGA8P53708 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.82■□□□□ 0.92
ITGA8P53708 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.82■□□□□ 0.92
ITGA8P53708 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ITGA8P53708 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ITGA8P53708 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ITGA8P53708 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
ITGA8P53708 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ITGA8P53708 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
ITGA8P53708 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ITGA8P53708 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ITGA8P53708 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ITGA8P53708 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ITGA8P53708 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ITGA8P53708 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ITGA8P53708 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGA8P53708 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ITGA8P53708 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGA8P53708 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGA8P53708 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ITGA8P53708 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.81■□□□□ 0.92
ITGA8P53708 IRS3P-201ENST00000223076 1006 ntBASIC20.81■□□□□ 0.92
ITGA8P53708 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ITGA8P53708 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
ITGA8P53708 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.81■□□□□ 0.92
ITGA8P53708 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.81■□□□□ 0.92
ITGA8P53708 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.81■□□□□ 0.92
ITGA8P53708 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
ITGA8P53708 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.81■□□□□ 0.92
ITGA8P53708 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGA8P53708 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.81■□□□□ 0.92
ITGA8P53708 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ITGA8P53708 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGA8P53708 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ITGA8P53708 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.8■□□□□ 0.92
ITGA8P53708 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ITGA8P53708 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.8■□□□□ 0.92
ITGA8P53708 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ITGA8P53708 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGA8P53708 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGA8P53708 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.8■□□□□ 0.92
ITGA8P53708 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ITGA8P53708 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ITGA8P53708 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ITGA8P53708 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGA8P53708 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.8■□□□□ 0.92
ITGA8P53708 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
ITGA8P53708 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGA8P53708 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGA8P53708 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.8■□□□□ 0.92
ITGA8P53708 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ITGA8P53708 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.8■□□□□ 0.92
ITGA8P53708 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.79■□□□□ 0.92
ITGA8P53708 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITGA8P53708 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ITGA8P53708 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ITGA8P53708 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITGA8P53708 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ITGA8P53708 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.79■□□□□ 0.92
ITGA8P53708 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITGA8P53708 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ITGA8P53708 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
ITGA8P53708 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.79■□□□□ 0.92
ITGA8P53708 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.78■□□□□ 0.92
ITGA8P53708 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGA8P53708 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
ITGA8P53708 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ITGA8P53708 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGA8P53708 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ITGA8P53708 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGA8P53708 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGA8P53708 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGA8P53708 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.78■□□□□ 0.92
ITGA8P53708 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGA8P53708 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.78■□□□□ 0.92
ITGA8P53708 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.78■□□□□ 0.92
ITGA8P53708 DUX4L2-201ENST00000561772 1275 ntBASIC20.78■□□□□ 0.92
ITGA8P53708 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ITGA8P53708 AC104187.1-201ENST00000607510 612 ntBASIC20.78■□□□□ 0.92
ITGA8P53708 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
ITGA8P53708 DUX4L6-201ENST00000626483 1275 ntBASIC20.78■□□□□ 0.92
ITGA8P53708 DUX4L1-201ENST00000627662 1275 ntBASIC20.78■□□□□ 0.92
ITGA8P53708 DUX4L8-201ENST00000629013 1275 ntBASIC20.78■□□□□ 0.92
ITGA8P53708 DUX4L3-201ENST00000630187 1275 ntBASIC20.78■□□□□ 0.92
ITGA8P53708 DUX4L7-201ENST00000630678 1275 ntBASIC20.78■□□□□ 0.92
ITGA8P53708 DUX4L5-201ENST00000630834 1275 ntBASIC20.78■□□□□ 0.92
ITGA8P53708 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGA8P53708 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.78■□□□□ 0.92
ITGA8P53708 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGA8P53708 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGA8P53708 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ITGA8P53708 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.78■□□□□ 0.92
ITGA8P53708 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ITGA8P53708 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ITGA8P53708 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ITGA8P53708 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITGA8P53708 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ITGA8P53708 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms