Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-5P52952 AC079598.2-202ENST00000546624 1451 ntBASIC17.35■□□□□ 0.37
NKX2-5P52952 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-5P52952 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-5P52952 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.35■□□□□ 0.37
NKX2-5P52952 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-5P52952 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX2-5P52952 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
NKX2-5P52952 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NKX2-5P52952 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.35■□□□□ 0.37
NKX2-5P52952 AC135050.7-201ENST00000624508 2218 ntBASIC17.35■□□□□ 0.37
NKX2-5P52952 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.35■□□□□ 0.37
NKX2-5P52952 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-5P52952 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-5P52952 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.34■□□□□ 0.37
NKX2-5P52952 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-5P52952 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-5P52952 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-5P52952 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-5P52952 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.34■□□□□ 0.37
NKX2-5P52952 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-5P52952 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NKX2-5P52952 RP9P-202ENST00000450133 1212 ntBASIC17.34■□□□□ 0.37
NKX2-5P52952 Z82202.1-201ENST00000623446 1880 ntBASIC17.34■□□□□ 0.37
NKX2-5P52952 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.34■□□□□ 0.37
NKX2-5P52952 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NKX2-5P52952 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
NKX2-5P52952 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NKX2-5P52952 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NKX2-5P52952 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.37
NKX2-5P52952 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
NKX2-5P52952 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.33■□□□□ 0.37
NKX2-5P52952 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NKX2-5P52952 AC004687.1-201ENST00000579003 1625 ntBASIC17.33■□□□□ 0.37
NKX2-5P52952 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NKX2-5P52952 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.33■□□□□ 0.37
NKX2-5P52952 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NKX2-5P52952 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
NKX2-5P52952 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-5P52952 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-5P52952 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-5P52952 AL592295.1-201ENST00000400984 884 ntBASIC17.33■□□□□ 0.36
NKX2-5P52952 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-5P52952 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.33■□□□□ 0.36
NKX2-5P52952 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.33■□□□□ 0.36
NKX2-5P52952 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.33■□□□□ 0.36
NKX2-5P52952 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-5P52952 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-5P52952 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-5P52952 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-5P52952 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-5P52952 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NKX2-5P52952 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.33■□□□□ 0.36
NKX2-5P52952 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-5P52952 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX2-5P52952 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.33■□□□□ 0.36
NKX2-5P52952 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.33■□□□□ 0.36
NKX2-5P52952 AC011270.2-201ENST00000624293 2550 ntBASIC17.33■□□□□ 0.36
NKX2-5P52952 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.32■□□□□ 0.36
NKX2-5P52952 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.32■□□□□ 0.36
NKX2-5P52952 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
NKX2-5P52952 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.32■□□□□ 0.36
NKX2-5P52952 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.32■□□□□ 0.36
NKX2-5P52952 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
NKX2-5P52952 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-5P52952 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-5P52952 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NKX2-5P52952 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-5P52952 DUX4L29-201ENST00000425409 679 ntBASIC17.32■□□□□ 0.36
NKX2-5P52952 AC009086.3-201ENST00000623486 1008 ntBASIC17.32■□□□□ 0.36
NKX2-5P52952 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-5P52952 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
NKX2-5P52952 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-5P52952 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NKX2-5P52952 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NKX2-5P52952 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
NKX2-5P52952 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX2-5P52952 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-5P52952 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-5P52952 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-5P52952 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-5P52952 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NKX2-5P52952 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-5P52952 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX2-5P52952 AL162393.1-201ENST00000437852 946 ntBASIC17.31■□□□□ 0.36
NKX2-5P52952 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX2-5P52952 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX2-5P52952 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-5P52952 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-5P52952 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NKX2-5P52952 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-5P52952 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-5P52952 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-5P52952 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-5P52952 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-5P52952 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX2-5P52952 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-5P52952 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
NKX2-5P52952 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-5P52952 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms