Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCNKAP51800 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCNKAP51800 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCNKAP51800 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.92■□□□□ 0.78
CLCNKAP51800 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.92■□□□□ 0.78
CLCNKAP51800 TSPY20P-201ENST00000450910 630 ntBASIC19.92■□□□□ 0.78
CLCNKAP51800 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.92■□□□□ 0.78
CLCNKAP51800 UNC93B5-201ENST00000530315 699 ntBASIC19.92■□□□□ 0.78
CLCNKAP51800 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CLCNKAP51800 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.92■□□□□ 0.78
CLCNKAP51800 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.92■□□□□ 0.78
CLCNKAP51800 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCNKAP51800 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.92■□□□□ 0.78
CLCNKAP51800 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCNKAP51800 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLCNKAP51800 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.92■□□□□ 0.78
CLCNKAP51800 KRT8P36-201ENST00000489121 1440 ntBASIC19.92■□□□□ 0.78
CLCNKAP51800 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.91■□□□□ 0.78
CLCNKAP51800 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CLCNKAP51800 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCNKAP51800 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CLCNKAP51800 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCNKAP51800 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.91■□□□□ 0.78
CLCNKAP51800 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCNKAP51800 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCNKAP51800 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CLCNKAP51800 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.91■□□□□ 0.78
CLCNKAP51800 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.91■□□□□ 0.78
CLCNKAP51800 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCNKAP51800 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLCNKAP51800 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCNKAP51800 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CLCNKAP51800 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCNKAP51800 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCNKAP51800 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCNKAP51800 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CLCNKAP51800 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCNKAP51800 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCNKAP51800 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
CLCNKAP51800 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCNKAP51800 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.91■□□□□ 0.78
CLCNKAP51800 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCNKAP51800 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCNKAP51800 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLCNKAP51800 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCNKAP51800 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.9■□□□□ 0.78
CLCNKAP51800 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCNKAP51800 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CLCNKAP51800 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.9■□□□□ 0.78
CLCNKAP51800 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCNKAP51800 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCNKAP51800 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CLCNKAP51800 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCNKAP51800 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCNKAP51800 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCNKAP51800 POU5F1P3-201ENST00000428824 1078 ntBASIC19.9■□□□□ 0.78
CLCNKAP51800 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCNKAP51800 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCNKAP51800 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CLCNKAP51800 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCNKAP51800 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCNKAP51800 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLCNKAP51800 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCNKAP51800 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCNKAP51800 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
CLCNKAP51800 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CLCNKAP51800 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.9■□□□□ 0.78
CLCNKAP51800 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.9■□□□□ 0.78
CLCNKAP51800 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
CLCNKAP51800 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCNKAP51800 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CLCNKAP51800 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCNKAP51800 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCNKAP51800 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLCNKAP51800 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
CLCNKAP51800 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.89■□□□□ 0.77
CLCNKAP51800 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCNKAP51800 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.89■□□□□ 0.77
CLCNKAP51800 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.89■□□□□ 0.77
CLCNKAP51800 FAM201B-201ENST00000458407 597 ntBASIC19.89■□□□□ 0.77
CLCNKAP51800 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
CLCNKAP51800 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLCNKAP51800 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLCNKAP51800 FP700111.2-201ENST00000619190 1892 ntBASIC19.89■□□□□ 0.77
CLCNKAP51800 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCNKAP51800 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCNKAP51800 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CLCNKAP51800 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLCNKAP51800 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.88■□□□□ 0.77
CLCNKAP51800 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CLCNKAP51800 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCNKAP51800 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCNKAP51800 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCNKAP51800 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCNKAP51800 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCNKAP51800 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCNKAP51800 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.88■□□□□ 0.77
CLCNKAP51800 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCNKAP51800 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLCNKAP51800 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms