Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
UBE2AP49459 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 AC245052.3-201ENST00000450182 901 ntBASIC12.84□□□□□ -0.35
UBE2AP49459 LGR4-203ENST00000480977 492 ntTSL 2 BASIC12.84□□□□□ -0.35
UBE2AP49459 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC12.84□□□□□ -0.35
UBE2AP49459 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC12.84□□□□□ -0.35
UBE2AP49459 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC12.84□□□□□ -0.35
UBE2AP49459 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC12.84□□□□□ -0.35
UBE2AP49459 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.84□□□□□ -0.35
UBE2AP49459 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 AC061975.6-201ENST00000579045 1553 ntBASIC12.84□□□□□ -0.35
UBE2AP49459 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
UBE2AP49459 LINC01521-201ENST00000504184 1943 ntBASIC12.84□□□□□ -0.35
UBE2AP49459 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC12.84□□□□□ -0.35
UBE2AP49459 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
UBE2AP49459 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
UBE2AP49459 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
UBE2AP49459 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
UBE2AP49459 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
UBE2AP49459 AC006128.1-201ENST00000624704 1661 ntBASIC12.83□□□□□ -0.35
UBE2AP49459 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
UBE2AP49459 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC12.83□□□□□ -0.36
UBE2AP49459 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
UBE2AP49459 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
UBE2AP49459 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC12.83□□□□□ -0.36
UBE2AP49459 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC12.83□□□□□ -0.36
UBE2AP49459 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
UBE2AP49459 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
UBE2AP49459 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
UBE2AP49459 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC12.83□□□□□ -0.36
UBE2AP49459 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC12.83□□□□□ -0.36
UBE2AP49459 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC12.83□□□□□ -0.36
UBE2AP49459 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC12.83□□□□□ -0.36
UBE2AP49459 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
UBE2AP49459 TERF1P2-201ENST00000583350 1212 ntBASIC12.83□□□□□ -0.36
UBE2AP49459 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.83□□□□□ -0.36
UBE2AP49459 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC12.83□□□□□ -0.36
UBE2AP49459 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC12.83□□□□□ -0.36
UBE2AP49459 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
UBE2AP49459 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC12.83□□□□□ -0.36
UBE2AP49459 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2AP49459 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2AP49459 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2AP49459 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC12.82□□□□□ -0.36
UBE2AP49459 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2AP49459 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2AP49459 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UBE2AP49459 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
UBE2AP49459 AC123595.1-201ENST00000440769 1046 ntBASIC12.82□□□□□ -0.36
UBE2AP49459 YBX1P1-201ENST00000445822 960 ntBASIC12.82□□□□□ -0.36
UBE2AP49459 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
UBE2AP49459 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC12.82□□□□□ -0.36
UBE2AP49459 TESC-206ENST00000541210 936 ntTSL 3 BASIC12.82□□□□□ -0.36
UBE2AP49459 DUX4L2-201ENST00000561772 1275 ntBASIC12.82□□□□□ -0.36
UBE2AP49459 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
UBE2AP49459 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC12.82□□□□□ -0.36
UBE2AP49459 DUX4L6-201ENST00000626483 1275 ntBASIC12.82□□□□□ -0.36
UBE2AP49459 DUX4L1-201ENST00000627662 1275 ntBASIC12.82□□□□□ -0.36
UBE2AP49459 DUX4L8-201ENST00000629013 1275 ntBASIC12.82□□□□□ -0.36
UBE2AP49459 DUX4L3-201ENST00000630187 1275 ntBASIC12.82□□□□□ -0.36
UBE2AP49459 DUX4L7-201ENST00000630678 1275 ntBASIC12.82□□□□□ -0.36
UBE2AP49459 DUX4L5-201ENST00000630834 1275 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms