Protein–RNA interactions for Protein: P46669

RPA43, DNA-directed RNA polymerase I subunit RPA43, yeastyeast

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA43P46669 snR78snR78 87 nt1.28□□□□□ -2.2
RPA43P46669 ATP17YDR377W 306 nt1.28□□□□□ -2.2
RPA43P46669 YNL050CYNL050C 813 nt1.28□□□□□ -2.2
RPA43P46669 YNL146C-AYNL146C-A 195 nt1.28□□□□□ -2.2
RPA43P46669 YPR096CYPR096C 303 nt1.28□□□□□ -2.2
RPA43P46669 YPR172WYPR172W 603 nt1.28□□□□□ -2.2
RPA43P46669 MEC1YBR136W 7107 nt1.28□□□□□ -2.2
RPA43P46669 ASM4YDL088C 1587 nt1.28□□□□□ -2.2
RPA43P46669 HIR3YJR140C 4947 nt1.27□□□□□ -2.21
RPA43P46669 YGL015CYGL015C 393 nt1.27□□□□□ -2.21
RPA43P46669 LSO2YGR169C-A 279 nt1.27□□□□□ -2.21
RPA43P46669 CMS1YLR003C 876 nt1.27□□□□□ -2.21
RPA43P46669 YHC1YLR298C 696 nt1.27□□□□□ -2.21
RPA43P46669 YBL083CYBL083C 426 nt1.27□□□□□ -2.21
RPA43P46669 YNL319WYNL319W 441 nt1.27□□□□□ -2.21
RPA43P46669 YOR146WYOR146W 306 nt1.27□□□□□ -2.21
RPA43P46669 YLR419WYLR419W 4308 nt1.27□□□□□ -2.21
RPA43P46669 YLR422WYLR422W 5799 nt1.27□□□□□ -2.21
RPA43P46669 MDM32YOR147W 1869 nt1.26□□□□□ -2.21
RPA43P46669 BRR2YER172C 6492 nt1.26□□□□□ -2.21
RPA43P46669 NOP53YPL146C 1368 nt1.26□□□□□ -2.21
RPA43P46669 KAR3YPR141C 2190 nt1.26□□□□□ -2.21
RPA43P46669 RBK1YCR036W 1002 nt1.26□□□□□ -2.21
RPA43P46669 SNO3YFL060C 669 nt1.26□□□□□ -2.21
RPA43P46669 SEC22YLR268W 645 nt1.26□□□□□ -2.21
RPA43P46669 YMR324CYMR324C 243 nt1.26□□□□□ -2.21
RPA43P46669 SNO2YNL334C 669 nt1.26□□□□□ -2.21
RPA43P46669 YBR224WYBR224W 516 nt1.26□□□□□ -2.21
RPA43P46669 SGD1YLR336C 2700 nt1.25□□□□□ -2.21
RPA43P46669 SKI3YPR189W 4299 nt1.25□□□□□ -2.21
RPA43P46669 DAS1YJL149W 1992 nt1.25□□□□□ -2.21
RPA43P46669 SMY1YKL079W 1971 nt1.25□□□□□ -2.21
RPA43P46669 YDR461C-AYDR461C-A 243 nt1.25□□□□□ -2.21
RPA43P46669 YFL012W-AYFL012W-A 375 nt1.25□□□□□ -2.21
RPA43P46669 MCM22YJR135C 720 nt1.25□□□□□ -2.21
RPA43P46669 YJR140W-AYJR140W-A 150 nt1.25□□□□□ -2.21
RPA43P46669 MEI5YPL121C 669 nt1.25□□□□□ -2.21
RPA43P46669 CTF4YPR135W 2784 nt1.25□□□□□ -2.21
RPA43P46669 TUS1YLR425W 3924 nt1.24□□□□□ -2.21
RPA43P46669 SEC21YNL287W 2808 nt1.24□□□□□ -2.21
RPA43P46669 SLX9YGR081C 633 nt1.24□□□□□ -2.21
RPA43P46669 tR(UCU)Q1tR(UCU)Q1 73 nt1.24□□□□□ -2.21
RPA43P46669 TIF11YMR260C 462 nt1.24□□□□□ -2.21
RPA43P46669 PGA1YNL158W 597 nt1.24□□□□□ -2.21
RPA43P46669 RPB11YOL005C 363 nt1.24□□□□□ -2.21
RPA43P46669 YPL197CYPL197C 414 nt1.24□□□□□ -2.21
RPA43P46669 ATP20YPR020W 348 nt1.24□□□□□ -2.21
RPA43P46669 COX1Q0045 1605 nt1.24□□□□□ -2.21
RPA43P46669 YLR149CYLR149C 2193 nt1.24□□□□□ -2.21
RPA43P46669 YGR250CYGR250C 2346 nt1.23□□□□□ -2.21
RPA43P46669 AFR1YDR085C 1863 nt1.23□□□□□ -2.21
RPA43P46669 YDR220CYDR220C 294 nt1.23□□□□□ -2.21
RPA43P46669 tQ(UUG)E2tQ(UUG)E2 72 nt1.23□□□□□ -2.21
RPA43P46669 YKL111CYKL111C 336 nt1.23□□□□□ -2.21
RPA43P46669 SEN15YMR059W 387 nt1.23□□□□□ -2.21
RPA43P46669 YOL029CYOL029C 606 nt1.23□□□□□ -2.21
RPA43P46669 PEP3YLR148W 2757 nt1.23□□□□□ -2.21
RPA43P46669 UTP13YLR222C 2454 nt1.23□□□□□ -2.21
RPA43P46669 KCS1YDR017C 3153 nt1.22□□□□□ -2.21
RPA43P46669 PMD1YER132C 5262 nt1.22□□□□□ -2.21
RPA43P46669 CTR9YOL145C 3234 nt1.22□□□□□ -2.21
RPA43P46669 YCR043CYCR043C 384 nt1.22□□□□□ -2.21
RPA43P46669 YFR009W-AYFR009W-A 258 nt1.22□□□□□ -2.21
RPA43P46669 SCEIQ0160 708 nt1.22□□□□□ -2.21
RPA43P46669 TIM10YHR005C-A 282 nt1.22□□□□□ -2.21
RPA43P46669 LRP1YHR081W 555 nt1.22□□□□□ -2.21
RPA43P46669 CDC31YOR257W 486 nt1.22□□□□□ -2.21
RPA43P46669 CAT8YMR280C 4302 nt1.22□□□□□ -2.21
RPA43P46669 MDM20YOL076W 2391 nt1.21□□□□□ -2.22
RPA43P46669 DCP2YNL118C 2913 nt1.21□□□□□ -2.22
RPA43P46669 SAC3YDR159W 3906 nt1.21□□□□□ -2.22
RPA43P46669 PRP21YJL203W 843 nt1.21□□□□□ -2.22
RPA43P46669 YJR087WYJR087W 351 nt1.21□□□□□ -2.22
RPA43P46669 YLR271WYLR271W 825 nt1.21□□□□□ -2.22
RPA43P46669 YPR177CYPR177C 372 nt1.21□□□□□ -2.22
RPA43P46669 REF2YDR195W 1602 nt1.21□□□□□ -2.22
RPA43P46669 SPO13YHR014W 876 nt1.2□□□□□ -2.22
RPA43P46669 NBP1YLR457C 960 nt1.2□□□□□ -2.22
RPA43P46669 COX7YMR256C 183 nt1.2□□□□□ -2.22
RPA43P46669 PBY1YBR094W 2262 nt1.19□□□□□ -2.22
RPA43P46669 CHZ1YER030W 462 nt1.19□□□□□ -2.22
RPA43P46669 IES5YER092W 378 nt1.19□□□□□ -2.22
RPA43P46669 YIL102CYIL102C 306 nt1.19□□□□□ -2.22
RPA43P46669 YIR020CYIR020C 303 nt1.19□□□□□ -2.22
RPA43P46669 IRC19YLL033W 693 nt1.19□□□□□ -2.22
RPA43P46669 YOL159CYOL159C 516 nt1.19□□□□□ -2.22
RPA43P46669 HMI1YOL095C 2121 nt1.19□□□□□ -2.22
RPA43P46669 MSC6YOR354C 2079 nt1.19□□□□□ -2.22
RPA43P46669 RLM1YPL089C 2031 nt1.18□□□□□ -2.22
RPA43P46669 YBR184WYBR184W 1572 nt1.18□□□□□ -2.22
RPA43P46669 snR79snR79 84 nt1.18□□□□□ -2.22
RPA43P46669 YDL187CYDL187C 330 nt1.18□□□□□ -2.22
RPA43P46669 YER088C-AYER088C-A 324 nt1.18□□□□□ -2.22
RPA43P46669 YHR214W-AYHR214W-A 486 nt1.18□□□□□ -2.22
RPA43P46669 tT(UGU)Q1tT(UGU)Q1 76 nt1.18□□□□□ -2.22
RPA43P46669 RCN1YKL159C 636 nt1.18□□□□□ -2.22
RPA43P46669 YAR068WYAR068W 486 nt1.18□□□□□ -2.22
RPA43P46669 CGI121YML036W 546 nt1.18□□□□□ -2.22
RPA43P46669 PET123YOR158W 957 nt1.18□□□□□ -2.22
RPA43P46669 YPR147CYPR147C 915 nt1.18□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 93.1 ms