Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
HTR3AP46098 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.7■□□□□ 0.58
HTR3AP46098 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HTR3AP46098 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.7■□□□□ 0.58
HTR3AP46098 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HTR3AP46098 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
HTR3AP46098 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.7■□□□□ 0.58
HTR3AP46098 AC013268.1-206ENST00000638368 961 ntBASIC18.7■□□□□ 0.58
HTR3AP46098 AC112229.1-201ENST00000639295 961 ntBASIC18.7■□□□□ 0.58
HTR3AP46098 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HTR3AP46098 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HTR3AP46098 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HTR3AP46098 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.7■□□□□ 0.58
HTR3AP46098 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.7■□□□□ 0.58
HTR3AP46098 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HTR3AP46098 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HTR3AP46098 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HTR3AP46098 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.69■□□□□ 0.58
HTR3AP46098 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HTR3AP46098 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HTR3AP46098 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR3AP46098 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR3AP46098 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.69■□□□□ 0.58
HTR3AP46098 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR3AP46098 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR3AP46098 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.69■□□□□ 0.58
HTR3AP46098 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.69■□□□□ 0.58
HTR3AP46098 AC007322.3-201ENST00000426526 701 ntBASIC18.69■□□□□ 0.58
HTR3AP46098 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.69■□□□□ 0.58
HTR3AP46098 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.69■□□□□ 0.58
HTR3AP46098 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HTR3AP46098 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
HTR3AP46098 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.69■□□□□ 0.58
HTR3AP46098 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.69■□□□□ 0.58
HTR3AP46098 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR3AP46098 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR3AP46098 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HTR3AP46098 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.69■□□□□ 0.58
HTR3AP46098 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HTR3AP46098 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.69■□□□□ 0.58
HTR3AP46098 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3AP46098 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3AP46098 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3AP46098 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3AP46098 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3AP46098 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3AP46098 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3AP46098 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3AP46098 AC007322.4-201ENST00000509611 723 ntBASIC18.68■□□□□ 0.58
HTR3AP46098 AL162412.1-201ENST00000567129 965 ntBASIC18.68■□□□□ 0.58
HTR3AP46098 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.68■□□□□ 0.58
HTR3AP46098 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.68■□□□□ 0.58
HTR3AP46098 AL591742.1-201ENST00000604433 565 ntBASIC18.68■□□□□ 0.58
HTR3AP46098 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3AP46098 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.68■□□□□ 0.58
HTR3AP46098 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3AP46098 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HTR3AP46098 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
HTR3AP46098 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3AP46098 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3AP46098 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HTR3AP46098 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3AP46098 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3AP46098 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3AP46098 AFG3L1P-217ENST00000557444 2447 ntBASIC18.67■□□□□ 0.58
HTR3AP46098 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.67■□□□□ 0.58
HTR3AP46098 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.67■□□□□ 0.58
HTR3AP46098 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HTR3AP46098 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.67■□□□□ 0.58
HTR3AP46098 AC022517.1-201ENST00000592429 346 ntBASIC18.67■□□□□ 0.58
HTR3AP46098 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HTR3AP46098 BID-214ENST00000617586 542 ntTSL 5 BASIC18.67■□□□□ 0.58
HTR3AP46098 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.67■□□□□ 0.58
HTR3AP46098 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HTR3AP46098 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.67■□□□□ 0.58
HTR3AP46098 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3AP46098 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.67■□□□□ 0.58
HTR3AP46098 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HTR3AP46098 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3AP46098 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3AP46098 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3AP46098 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3AP46098 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3AP46098 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3AP46098 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HTR3AP46098 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HTR3AP46098 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HTR3AP46098 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
HTR3AP46098 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HTR3AP46098 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HTR3AP46098 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HTR3AP46098 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.66■□□□□ 0.58
HTR3AP46098 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms