Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.38■□□□□ 0.69
SSR2P43308 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.38■□□□□ 0.69
SSR2P43308 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.38■□□□□ 0.69
SSR2P43308 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.38■□□□□ 0.69
SSR2P43308 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR2P43308 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SSR2P43308 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.38■□□□□ 0.69
SSR2P43308 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SSR2P43308 AC092720.2-201ENST00000602388 1665 ntBASIC19.38■□□□□ 0.69
SSR2P43308 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR2P43308 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSR2P43308 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.38■□□□□ 0.69
SSR2P43308 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSR2P43308 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SSR2P43308 AC092667.1-201ENST00000434301 2586 ntBASIC19.38■□□□□ 0.69
SSR2P43308 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR2P43308 AIRN-201ENST00000601203 4374 ntBASIC19.37■□□□□ 0.69
SSR2P43308 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.37■□□□□ 0.69
SSR2P43308 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR2P43308 AC020907.5-201ENST00000624372 1936 ntBASIC19.37■□□□□ 0.69
SSR2P43308 GABARAPL3-202ENST00000624044 1851 ntBASIC19.37■□□□□ 0.69
SSR2P43308 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR2P43308 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR2P43308 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR2P43308 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR2P43308 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR2P43308 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR2P43308 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR2P43308 MIR663A-201ENST00000385250 93 ntBASIC19.37■□□□□ 0.69
SSR2P43308 MCRIP2P1-201ENST00000394346 511 ntBASIC19.37■□□□□ 0.69
SSR2P43308 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR2P43308 OR10C1-204ENST00000622521 1039 ntBASIC19.37■□□□□ 0.69
SSR2P43308 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR2P43308 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSR2P43308 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSR2P43308 LINC01521-201ENST00000504184 1943 ntBASIC19.37■□□□□ 0.69
SSR2P43308 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.37■□□□□ 0.69
SSR2P43308 KRT8P36-201ENST00000489121 1440 ntBASIC19.36■□□□□ 0.69
SSR2P43308 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR2P43308 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SSR2P43308 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SSR2P43308 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR2P43308 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.36■□□□□ 0.69
SSR2P43308 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR2P43308 AL356652.1-201ENST00000615962 565 ntBASIC19.36■□□□□ 0.69
SSR2P43308 AC100791.3-201ENST00000617619 330 ntBASIC19.36■□□□□ 0.69
SSR2P43308 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.36■□□□□ 0.69
SSR2P43308 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR2P43308 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSR2P43308 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.36■□□□□ 0.69
SSR2P43308 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR2P43308 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.36■□□□□ 0.69
SSR2P43308 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSR2P43308 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.35■□□□□ 0.69
SSR2P43308 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
SSR2P43308 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SSR2P43308 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.35■□□□□ 0.69
SSR2P43308 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SSR2P43308 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.35■□□□□ 0.69
SSR2P43308 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSR2P43308 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.35■□□□□ 0.69
SSR2P43308 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SSR2P43308 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SSR2P43308 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.34■□□□□ 0.69
SSR2P43308 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.34■□□□□ 0.69
SSR2P43308 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.34■□□□□ 0.69
SSR2P43308 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSR2P43308 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.34■□□□□ 0.69
SSR2P43308 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR2P43308 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.34■□□□□ 0.69
SSR2P43308 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSR2P43308 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.34■□□□□ 0.69
SSR2P43308 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SSR2P43308 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
SSR2P43308 RAP2CP1-201ENST00000605103 478 ntBASIC19.34■□□□□ 0.69
SSR2P43308 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSR2P43308 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR2P43308 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SSR2P43308 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR2P43308 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.33■□□□□ 0.69
SSR2P43308 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SSR2P43308 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SSR2P43308 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SSR2P43308 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SSR2P43308 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SSR2P43308 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.33■□□□□ 0.68
SSR2P43308 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms