Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 PHO80YOL001W 882 nt1.37□□□□□ -2.19
RTR1P40084 PET123YOR158W 957 nt1.37□□□□□ -2.19
RTR1P40084 YHR214C-CYHR214C-C 1437 nt1.37□□□□□ -2.19
RTR1P40084 NCA2YPR155C 1851 nt1.37□□□□□ -2.19
RTR1P40084 YIL082WYIL082W 873 nt1.36□□□□□ -2.19
RTR1P40084 YNL235CYNL235C 432 nt1.36□□□□□ -2.19
RTR1P40084 YOL106WYOL106W 354 nt1.36□□□□□ -2.19
RTR1P40084 YOR032W-AYOR032W-A 201 nt1.36□□□□□ -2.19
RTR1P40084 GPX2YBR244W 489 nt1.36□□□□□ -2.19
RTR1P40084 YDR210W-AYDR210W-A 1317 nt1.36□□□□□ -2.19
RTR1P40084 YOR343W-AYOR343W-A 1317 nt1.36□□□□□ -2.19
RTR1P40084 PBY1YBR094W 2262 nt1.35□□□□□ -2.19
RTR1P40084 YCR043CYCR043C 384 nt1.35□□□□□ -2.19
RTR1P40084 YDR248CYDR248C 582 nt1.35□□□□□ -2.19
RTR1P40084 YIL020C-AYIL020C-A 339 nt1.35□□□□□ -2.19
RTR1P40084 YJL015CYJL015C 285 nt1.35□□□□□ -2.19
RTR1P40084 HCH1YNL281W 462 nt1.35□□□□□ -2.19
RTR1P40084 MSC6YOR354C 2079 nt1.35□□□□□ -2.19
RTR1P40084 MLH3YPL164C 2148 nt1.34□□□□□ -2.19
RTR1P40084 YDR194W-AYDR194W-A 153 nt1.34□□□□□ -2.19
RTR1P40084 YGR283CYGR283C 1026 nt1.34□□□□□ -2.19
RTR1P40084 YHR050W-AYHR050W-A 171 nt1.34□□□□□ -2.19
RTR1P40084 YBL068W-AYBL068W-A 237 nt1.34□□□□□ -2.19
RTR1P40084 YNL226WYNL226W 411 nt1.34□□□□□ -2.19
RTR1P40084 EST2YLR318W 2655 nt1.33□□□□□ -2.2
RTR1P40084 YLR149CYLR149C 2193 nt1.33□□□□□ -2.2
RTR1P40084 snR59snR59 78 nt1.33□□□□□ -2.2
RTR1P40084 INA22YIR024C 651 nt1.33□□□□□ -2.2
RTR1P40084 RPC25YKL144C 639 nt1.33□□□□□ -2.2
RTR1P40084 YLR307C-AYLR307C-A 264 nt1.33□□□□□ -2.2
RTR1P40084 YBL029C-AYBL029C-A 285 nt1.33□□□□□ -2.2
RTR1P40084 RLM1YPL089C 2031 nt1.33□□□□□ -2.2
RTR1P40084 VPS54YDR027C 2670 nt1.33□□□□□ -2.2
RTR1P40084 NOT5YPR072W 1683 nt1.32□□□□□ -2.2
RTR1P40084 SAG1YJR004C 1953 nt1.32□□□□□ -2.2
RTR1P40084 SPT7YBR081C 3999 nt1.32□□□□□ -2.2
RTR1P40084 SMC4YLR086W 4257 nt1.32□□□□□ -2.2
RTR1P40084 YIR021W-AYIR021W-A 213 nt1.32□□□□□ -2.2
RTR1P40084 YBL062WYBL062W 381 nt1.32□□□□□ -2.2
RTR1P40084 YBL083CYBL083C 426 nt1.32□□□□□ -2.2
RTR1P40084 RTC6YPL183W-A 282 nt1.32□□□□□ -2.2
RTR1P40084 UBS1YBR165W 834 nt1.32□□□□□ -2.2
RTR1P40084 RSM22YKL155C 1887 nt1.32□□□□□ -2.2
RTR1P40084 ROM2YLR371W 4071 nt1.31□□□□□ -2.2
RTR1P40084 ALK1YGL021W 2283 nt1.31□□□□□ -2.2
RTR1P40084 VMA7YGR020C 357 nt1.31□□□□□ -2.2
RTR1P40084 YJL022WYJL022W 309 nt1.31□□□□□ -2.2
RTR1P40084 MSN5YDR335W 3675 nt1.31□□□□□ -2.2
RTR1P40084 OST1YJL002C 1431 nt1.31□□□□□ -2.2
RTR1P40084 SLS1YLR139C 1932 nt1.3□□□□□ -2.2
RTR1P40084 KAP122YGL016W 3246 nt1.3□□□□□ -2.2
RTR1P40084 DPB11YJL090C 2295 nt1.3□□□□□ -2.2
RTR1P40084 IRC2YDR112W 309 nt1.3□□□□□ -2.2
RTR1P40084 BNA7YDR428C 786 nt1.3□□□□□ -2.2
RTR1P40084 YPL080CYPL080C 327 nt1.3□□□□□ -2.2
RTR1P40084 ATP15YPL271W 189 nt1.3□□□□□ -2.2
RTR1P40084 UTP20YBL004W 7482 nt1.3□□□□□ -2.2
RTR1P40084 BEM2YER155C 6504 nt1.29□□□□□ -2.2
RTR1P40084 YER138W-AYER138W-A 105 nt1.29□□□□□ -2.2
RTR1P40084 RSM27YGR215W 333 nt1.29□□□□□ -2.2
RTR1P40084 VPS55YJR044C 423 nt1.29□□□□□ -2.2
RTR1P40084 YBL107W-AYBL107W-A 105 nt1.29□□□□□ -2.2
RTR1P40084 YOR152CYOR152C 771 nt1.29□□□□□ -2.2
RTR1P40084 QCR9YGR183C 201 nt1.28□□□□□ -2.2
RTR1P40084 CIC1YHR052W 1131 nt1.28□□□□□ -2.2
RTR1P40084 RRT15YLR162W-A 189 nt1.28□□□□□ -2.2
RTR1P40084 YDR115WYDR115W 318 nt1.27□□□□□ -2.21
RTR1P40084 MTC7YEL033W 420 nt1.27□□□□□ -2.21
RTR1P40084 TDA2YER071C 381 nt1.27□□□□□ -2.21
RTR1P40084 LIN1YHR156C 1023 nt1.27□□□□□ -2.21
RTR1P40084 DFG10YIL049W 762 nt1.27□□□□□ -2.21
RTR1P40084 TMA22YJR014W 597 nt1.27□□□□□ -2.21
RTR1P40084 COF1YLL050C 432 nt1.27□□□□□ -2.21
RTR1P40084 SMD3YLR147C 306 nt1.27□□□□□ -2.21
RTR1P40084 ISF1YMR081C 1017 nt1.27□□□□□ -2.21
RTR1P40084 URA10YMR271C 684 nt1.27□□□□□ -2.21
RTR1P40084 YOR364WYOR364W 369 nt1.27□□□□□ -2.21
RTR1P40084 RVS161YCR009C 798 nt1.26□□□□□ -2.21
RTR1P40084 YDL068WYDL068W 330 nt1.26□□□□□ -2.21
RTR1P40084 YMR242W-AYMR242W-A 90 nt1.26□□□□□ -2.21
RTR1P40084 BRX1YOL077C 876 nt1.26□□□□□ -2.21
RTR1P40084 YBR224WYBR224W 516 nt1.26□□□□□ -2.21
RTR1P40084 SMY1YKL079W 1971 nt1.26□□□□□ -2.21
RTR1P40084 MSH5YDL154W 2706 nt1.26□□□□□ -2.21
RTR1P40084 SGD1YLR336C 2700 nt1.26□□□□□ -2.21
RTR1P40084 RAD9YDR217C 3930 nt1.25□□□□□ -2.21
RTR1P40084 YFL012W-AYFL012W-A 375 nt1.25□□□□□ -2.21
RTR1P40084 YFR057WYFR057W 456 nt1.25□□□□□ -2.21
RTR1P40084 ACF4YJR083C 930 nt1.25□□□□□ -2.21
RTR1P40084 CMS1YLR003C 876 nt1.25□□□□□ -2.21
RTR1P40084 YLR217WYLR217W 324 nt1.25□□□□□ -2.21
RTR1P40084 ARV1YLR242C 966 nt1.25□□□□□ -2.21
RTR1P40084 SEC22YLR268W 645 nt1.25□□□□□ -2.21
RTR1P40084 CGI121YML036W 546 nt1.25□□□□□ -2.21
RTR1P40084 MRPS8YMR158W 468 nt1.25□□□□□ -2.21
RTR1P40084 AZF1YOR113W 2745 nt1.25□□□□□ -2.21
RTR1P40084 SNF5YBR289W 2718 nt1.24□□□□□ -2.21
RTR1P40084 PEP3YLR148W 2757 nt1.24□□□□□ -2.21
RTR1P40084 YER038W-AYER038W-A 381 nt1.24□□□□□ -2.21
RTR1P40084 IES5YER092W 378 nt1.24□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 9 ms