Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN1P35523 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
CLCN1P35523 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CLCN1P35523 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
CLCN1P35523 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CLCN1P35523 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CLCN1P35523 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
CLCN1P35523 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.03■■□□□ 1.28
CLCN1P35523 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
CLCN1P35523 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
CLCN1P35523 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN1P35523 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN1P35523 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.02■■□□□ 1.28
CLCN1P35523 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN1P35523 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.02■■□□□ 1.28
CLCN1P35523 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.02■■□□□ 1.28
CLCN1P35523 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.02■■□□□ 1.28
CLCN1P35523 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN1P35523 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN1P35523 AC008764.7-201ENST00000593779 1081 ntBASIC23.02■■□□□ 1.28
CLCN1P35523 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN1P35523 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.02■■□□□ 1.28
CLCN1P35523 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC23.01■■□□□ 1.27
CLCN1P35523 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.01■■□□□ 1.27
CLCN1P35523 AC007225.1-201ENST00000566331 1836 ntBASIC23.01■■□□□ 1.27
CLCN1P35523 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.01■■□□□ 1.27
CLCN1P35523 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLCN1P35523 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLCN1P35523 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLCN1P35523 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.01■■□□□ 1.27
CLCN1P35523 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.01■■□□□ 1.27
CLCN1P35523 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.01■■□□□ 1.27
CLCN1P35523 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.01■■□□□ 1.27
CLCN1P35523 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
CLCN1P35523 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLCN1P35523 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.01■■□□□ 1.27
CLCN1P35523 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
CLCN1P35523 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23■■□□□ 1.27
CLCN1P35523 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC23■■□□□ 1.27
CLCN1P35523 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLCN1P35523 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLCN1P35523 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CLCN1P35523 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23■■□□□ 1.27
CLCN1P35523 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23■■□□□ 1.27
CLCN1P35523 AL031432.3-201ENST00000607698 485 ntBASIC23■■□□□ 1.27
CLCN1P35523 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLCN1P35523 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CLCN1P35523 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CLCN1P35523 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23■■□□□ 1.27
CLCN1P35523 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23■■□□□ 1.27
CLCN1P35523 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLCN1P35523 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLCN1P35523 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLCN1P35523 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23■■□□□ 1.27
CLCN1P35523 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CLCN1P35523 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLCN1P35523 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC23■■□□□ 1.27
CLCN1P35523 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLCN1P35523 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
CLCN1P35523 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLCN1P35523 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CLCN1P35523 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC22.99■■□□□ 1.27
CLCN1P35523 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLCN1P35523 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
CLCN1P35523 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLCN1P35523 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLCN1P35523 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLCN1P35523 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
CLCN1P35523 EDA-201ENST00000338901 1233 ntBASIC22.99■■□□□ 1.27
CLCN1P35523 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLCN1P35523 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLCN1P35523 AC099791.1-201ENST00000416440 715 ntBASIC22.99■■□□□ 1.27
CLCN1P35523 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.99■■□□□ 1.27
CLCN1P35523 AC126544.1-201ENST00000580842 1059 ntBASIC22.99■■□□□ 1.27
CLCN1P35523 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.99■■□□□ 1.27
CLCN1P35523 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.99■■□□□ 1.27
CLCN1P35523 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.99■■□□□ 1.27
CLCN1P35523 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLCN1P35523 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLCN1P35523 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.99■■□□□ 1.27
CLCN1P35523 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLCN1P35523 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.98■■□□□ 1.27
CLCN1P35523 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLCN1P35523 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CLCN1P35523 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms