Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 TAF6YGL112C 1551 nt4.94□□□□□ -1.62
RIM101P33400 FRT2YAL028W 1587 nt4.94□□□□□ -1.62
RIM101P33400 YBL012CYBL012C 402 nt4.93□□□□□ -1.62
RIM101P33400 PFF1YBR074W 2931 nt4.93□□□□□ -1.62
RIM101P33400 YDL025W-AYDL025W-A 105 nt4.92□□□□□ -1.62
RIM101P33400 FMP16YDR070C 282 nt4.92□□□□□ -1.62
RIM101P33400 YDR371C-AYDR371C-A 105 nt4.92□□□□□ -1.62
RIM101P33400 YHR032W-AYHR032W-A 180 nt4.92□□□□□ -1.62
RIM101P33400 MPH1YIR002C 2982 nt4.92□□□□□ -1.62
RIM101P33400 BCK2YER167W 2556 nt4.92□□□□□ -1.62
RIM101P33400 NUP133YKR082W 3474 nt4.92□□□□□ -1.62
RIM101P33400 GAL10YBR019C 2100 nt4.91□□□□□ -1.62
RIM101P33400 POM152YMR129W 4014 nt4.91□□□□□ -1.62
RIM101P33400 RFX1YLR176C 2436 nt4.91□□□□□ -1.62
RIM101P33400 ERB1YMR049C 2424 nt4.91□□□□□ -1.62
RIM101P33400 NIP100YPL174C 2607 nt4.91□□□□□ -1.62
RIM101P33400 YMR196WYMR196W 3267 nt4.91□□□□□ -1.62
RIM101P33400 TOP1YOL006C 2310 nt4.91□□□□□ -1.62
RIM101P33400 FAP7YDL166C 594 nt4.9□□□□□ -1.63
RIM101P33400 EDS1YBR033W 2760 nt4.9□□□□□ -1.63
RIM101P33400 EGT2YNL327W 3126 nt4.9□□□□□ -1.63
RIM101P33400 SEF1YBL066C 3447 nt4.9□□□□□ -1.63
RIM101P33400 SNF2YOR290C 5112 nt4.89□□□□□ -1.63
RIM101P33400 SLY1YDR189W 2001 nt4.89□□□□□ -1.63
RIM101P33400 ECM15YBL001C 315 nt4.89□□□□□ -1.63
RIM101P33400 SPC98YNL126W 2541 nt4.89□□□□□ -1.63
RIM101P33400 YDR261C-DYDR261C-D 4815 nt4.89□□□□□ -1.63
RIM101P33400 RPL42BYHR141C 321 nt4.88□□□□□ -1.63
RIM101P33400 APL4YPR029C 2499 nt4.88□□□□□ -1.63
RIM101P33400 ITC1YGL133W 3795 nt4.88□□□□□ -1.63
RIM101P33400 PHO81YGR233C 3537 nt4.88□□□□□ -1.63
RIM101P33400 YCR043CYCR043C 384 nt4.87□□□□□ -1.63
RIM101P33400 RPS25BYLR333C 327 nt4.87□□□□□ -1.63
RIM101P33400 SAF1YBR280C 1914 nt4.87□□□□□ -1.63
RIM101P33400 PMC1YGL006W 3522 nt4.86□□□□□ -1.63
RIM101P33400 YFR016CYFR016C 3702 nt4.86□□□□□ -1.63
RIM101P33400 RAD1YPL022W 3303 nt4.86□□□□□ -1.63
RIM101P33400 MDV1YJL112W 2145 nt4.86□□□□□ -1.63
RIM101P33400 ISA1YLL027W 753 nt4.86□□□□□ -1.63
RIM101P33400 FLO10YKR102W 3510 nt4.86□□□□□ -1.63
RIM101P33400 XRN1YGL173C 4587 nt4.86□□□□□ -1.63
RIM101P33400 SNF5YBR289W 2718 nt4.86□□□□□ -1.63
RIM101P33400 SAK1YER129W 3429 nt4.85□□□□□ -1.63
RIM101P33400 YDR210W-BYDR210W-B 5313 nt4.85□□□□□ -1.63
RIM101P33400 YDR261W-BYDR261W-B 5313 nt4.85□□□□□ -1.63
RIM101P33400 YFL002W-AYFL002W-A 5313 nt4.85□□□□□ -1.63
RIM101P33400 YGR161W-BYGR161W-B 5313 nt4.85□□□□□ -1.63
RIM101P33400 YLR410W-BYLR410W-B 5313 nt4.85□□□□□ -1.63
RIM101P33400 YCL019WYCL019W 5313 nt4.85□□□□□ -1.63
RIM101P33400 VMA1YDL185W 3216 nt4.85□□□□□ -1.63
RIM101P33400 VPS35YJL154C 2835 nt4.84□□□□□ -1.63
RIM101P33400 KAP95YLR347C 2586 nt4.84□□□□□ -1.63
RIM101P33400 ZIP2YGL249W 2115 nt4.84□□□□□ -1.63
RIM101P33400 YJL120WYJL120W 324 nt4.84□□□□□ -1.63
RIM101P33400 VBA4YDR119W 2307 nt4.84□□□□□ -1.64
RIM101P33400 RPN2YIL075C 2838 nt4.83□□□□□ -1.64
RIM101P33400 ORC1YML065W 2745 nt4.83□□□□□ -1.64
RIM101P33400 GAL11YOL051W 3246 nt4.83□□□□□ -1.64
RIM101P33400 SRP14YDL092W 441 nt4.83□□□□□ -1.64
RIM101P33400 SMY1YKL079W 1971 nt4.83□□□□□ -1.64
RIM101P33400 MNN4YKL201C 3537 nt4.83□□□□□ -1.64
RIM101P33400 TAF5YBR198C 2397 nt4.83□□□□□ -1.64
RIM101P33400 AI2Q0055 2565 nt4.82□□□□□ -1.64
RIM101P33400 SPT16YGL207W 3108 nt4.82□□□□□ -1.64
RIM101P33400 SEN1YLR430W 6696 nt4.82□□□□□ -1.64
RIM101P33400 PAU3YCR104W 375 nt4.81□□□□□ -1.64
RIM101P33400 PIM1YBL022C 3402 nt4.81□□□□□ -1.64
RIM101P33400 YGR051CYGR051C 324 nt4.8□□□□□ -1.64
RIM101P33400 RPS12YOR369C 432 nt4.8□□□□□ -1.64
RIM101P33400 CHS6YJL099W 2241 nt4.79□□□□□ -1.64
RIM101P33400 BOI1YBL085W 2943 nt4.79□□□□□ -1.64
RIM101P33400 RPH1YER169W 2391 nt4.79□□□□□ -1.64
RIM101P33400 snR81snR81 201 nt4.78□□□□□ -1.64
RIM101P33400 MET4YNL103W 2019 nt4.78□□□□□ -1.64
RIM101P33400 PIP2YOR363C 2991 nt4.78□□□□□ -1.64
RIM101P33400 MYO5YMR109W 3660 nt4.77□□□□□ -1.65
RIM101P33400 YCF1YDR135C 4548 nt4.76□□□□□ -1.65
RIM101P33400 EMC1YCL045C 2283 nt4.76□□□□□ -1.65
RIM101P33400 SBE22YHR103W 2559 nt4.76□□□□□ -1.65
RIM101P33400 UTP14YML093W 2700 nt4.76□□□□□ -1.65
RIM101P33400 VPS3YDR495C 3036 nt4.76□□□□□ -1.65
RIM101P33400 SNT1YCR033W 3681 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)CtK(CUU)C 73 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)D1tK(CUU)D1 73 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)D2tK(CUU)D2 73 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)E1tK(CUU)E1 73 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)E2tK(CUU)E2 73 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)FtK(CUU)F 73 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)G1tK(CUU)G1 73 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)G2tK(CUU)G2 73 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)G3tK(CUU)G3 73 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)ItK(CUU)I 73 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)JtK(CUU)J 73 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)KtK(CUU)K 73 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)MtK(CUU)M 73 nt4.76□□□□□ -1.65
RIM101P33400 tK(CUU)PtK(CUU)P 73 nt4.76□□□□□ -1.65
RIM101P33400 CHO2YGR157W 2610 nt4.76□□□□□ -1.65
RIM101P33400 TOM5YPR133W-A 153 nt4.76□□□□□ -1.65
RIM101P33400 YPK9YOR291W 4419 nt4.76□□□□□ -1.65
RIM101P33400 FRE2YKL220C 2136 nt4.75□□□□□ -1.65
Retrieved 100 of 7,029 protein–RNA pairs in 65 ms