Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-FP30511 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-FP30511 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-FP30511 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-FP30511 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-FP30511 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.71■□□□□ 0.91
HLA-FP30511 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.71■□□□□ 0.91
HLA-FP30511 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.71■□□□□ 0.91
HLA-FP30511 AC069544.1-201ENST00000609399 999 ntBASIC20.71■□□□□ 0.91
HLA-FP30511 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
HLA-FP30511 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-FP30511 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-FP30511 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HLA-FP30511 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
HLA-FP30511 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-FP30511 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-FP30511 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.7■□□□□ 0.9
HLA-FP30511 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HLA-FP30511 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-FP30511 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.7■□□□□ 0.9
HLA-FP30511 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-FP30511 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-FP30511 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.7■□□□□ 0.9
HLA-FP30511 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-FP30511 POM121L13P-201ENST00000422362 380 ntBASIC20.7■□□□□ 0.9
HLA-FP30511 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HLA-FP30511 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-FP30511 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.7■□□□□ 0.9
HLA-FP30511 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-FP30511 AC006557.6-201ENST00000623071 864 ntBASIC20.7■□□□□ 0.9
HLA-FP30511 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-FP30511 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-FP30511 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.7■□□□□ 0.9
HLA-FP30511 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.7■□□□□ 0.9
HLA-FP30511 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-FP30511 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-FP30511 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-FP30511 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-FP30511 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HLA-FP30511 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HLA-FP30511 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-FP30511 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-FP30511 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
HLA-FP30511 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-FP30511 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-FP30511 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-FP30511 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-FP30511 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
HLA-FP30511 AC093827.2-201ENST00000512654 315 ntBASIC20.69■□□□□ 0.9
HLA-FP30511 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.69■□□□□ 0.9
HLA-FP30511 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-FP30511 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.69■□□□□ 0.9
HLA-FP30511 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-FP30511 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
HLA-FP30511 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-FP30511 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-FP30511 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.69■□□□□ 0.9
HLA-FP30511 AL121603.2-201ENST00000557373 2117 ntBASIC20.69■□□□□ 0.9
HLA-FP30511 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-FP30511 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
HLA-FP30511 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HLA-FP30511 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HLA-FP30511 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.69■□□□□ 0.9
HLA-FP30511 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.68■□□□□ 0.9
HLA-FP30511 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-FP30511 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-FP30511 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-FP30511 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-FP30511 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.68■□□□□ 0.9
HLA-FP30511 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HLA-FP30511 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-FP30511 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.68■□□□□ 0.9
HLA-FP30511 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-FP30511 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-FP30511 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-FP30511 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
HLA-FP30511 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-FP30511 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HLA-FP30511 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.68■□□□□ 0.9
HLA-FP30511 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HLA-FP30511 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-FP30511 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-FP30511 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-FP30511 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HLA-FP30511 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.67■□□□□ 0.9
HLA-FP30511 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HLA-FP30511 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HLA-FP30511 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.67■□□□□ 0.9
HLA-FP30511 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
HLA-FP30511 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
HLA-FP30511 AL359736.2-201ENST00000621992 437 ntBASIC20.67■□□□□ 0.9
HLA-FP30511 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-FP30511 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-FP30511 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-FP30511 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-FP30511 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-FP30511 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HLA-FP30511 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HLA-FP30511 AC005229.4-201ENST00000610085 2198 ntBASIC20.66■□□□□ 0.9
HLA-FP30511 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms