Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN3P26045 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPN3P26045 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
PTPN3P26045 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
PTPN3P26045 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN3P26045 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN3P26045 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN3P26045 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN3P26045 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN3P26045 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN3P26045 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN3P26045 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN3P26045 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
PTPN3P26045 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PTPN3P26045 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.74■□□□□ 0.91
PTPN3P26045 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PTPN3P26045 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN3P26045 AL356652.1-201ENST00000615962 565 ntBASIC20.74■□□□□ 0.91
PTPN3P26045 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPN3P26045 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPN3P26045 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN3P26045 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PTPN3P26045 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PTPN3P26045 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PTPN3P26045 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPN3P26045 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN3P26045 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
PTPN3P26045 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
PTPN3P26045 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN3P26045 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPN3P26045 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PTPN3P26045 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN3P26045 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN3P26045 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN3P26045 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPN3P26045 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.73■□□□□ 0.91
PTPN3P26045 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.73■□□□□ 0.91
PTPN3P26045 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PTPN3P26045 AC080038.1-201ENST00000611274 1154 ntBASIC20.73■□□□□ 0.91
PTPN3P26045 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.73■□□□□ 0.91
PTPN3P26045 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN3P26045 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN3P26045 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.73■□□□□ 0.91
PTPN3P26045 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN3P26045 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN3P26045 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PTPN3P26045 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTPN3P26045 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN3P26045 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN3P26045 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN3P26045 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPN3P26045 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPN3P26045 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN3P26045 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN3P26045 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN3P26045 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN3P26045 PGM5P4-201ENST00000421970 445 ntBASIC20.72■□□□□ 0.91
PTPN3P26045 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN3P26045 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN3P26045 AC100791.3-201ENST00000617619 330 ntBASIC20.72■□□□□ 0.91
PTPN3P26045 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN3P26045 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN3P26045 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPN3P26045 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.72■□□□□ 0.91
PTPN3P26045 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN3P26045 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTPN3P26045 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.72■□□□□ 0.91
PTPN3P26045 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN3P26045 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PTPN3P26045 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPN3P26045 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PTPN3P26045 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN3P26045 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PTPN3P26045 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN3P26045 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN3P26045 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.71■□□□□ 0.91
PTPN3P26045 AL137784.2-201ENST00000607332 1000 ntBASIC20.71■□□□□ 0.91
PTPN3P26045 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN3P26045 AC073111.5-205ENST00000641717 521 ntBASIC20.71■□□□□ 0.91
PTPN3P26045 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
PTPN3P26045 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN3P26045 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN3P26045 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN3P26045 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN3P26045 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPN3P26045 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN3P26045 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
PTPN3P26045 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN3P26045 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.71■□□□□ 0.91
PTPN3P26045 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.71■□□□□ 0.91
PTPN3P26045 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTPN3P26045 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
PTPN3P26045 SMG8-203ENST00000578922 2178 ntBASIC20.7■□□□□ 0.91
PTPN3P26045 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
PTPN3P26045 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PTPN3P26045 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN3P26045 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PTPN3P26045 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.7■□□□□ 0.9
PTPN3P26045 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPN3P26045 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms