Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LAMA1P25391 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LAMA1P25391 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.05■□□□□ 0.8
LAMA1P25391 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.05■□□□□ 0.8
LAMA1P25391 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LAMA1P25391 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.04■□□□□ 0.8
LAMA1P25391 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LAMA1P25391 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.04■□□□□ 0.8
LAMA1P25391 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.04■□□□□ 0.8
LAMA1P25391 KRT18P57-201ENST00000443599 1254 ntBASIC20.04■□□□□ 0.8
LAMA1P25391 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LAMA1P25391 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LAMA1P25391 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LAMA1P25391 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.04■□□□□ 0.8
LAMA1P25391 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LAMA1P25391 CYP2D8P-201ENST00000433633 1490 ntBASIC20.04■□□□□ 0.8
LAMA1P25391 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LAMA1P25391 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LAMA1P25391 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.04■□□□□ 0.8
LAMA1P25391 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LAMA1P25391 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
LAMA1P25391 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LAMA1P25391 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.04■□□□□ 0.8
LAMA1P25391 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.04■□□□□ 0.8
LAMA1P25391 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LAMA1P25391 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.04■□□□□ 0.8
LAMA1P25391 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LAMA1P25391 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LAMA1P25391 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.04■□□□□ 0.8
LAMA1P25391 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.04■□□□□ 0.8
LAMA1P25391 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LAMA1P25391 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMA1P25391 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.03■□□□□ 0.8
LAMA1P25391 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMA1P25391 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.03■□□□□ 0.8
LAMA1P25391 AC006557.6-201ENST00000623071 864 ntBASIC20.03■□□□□ 0.8
LAMA1P25391 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.03■□□□□ 0.8
LAMA1P25391 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.03■□□□□ 0.8
LAMA1P25391 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMA1P25391 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LAMA1P25391 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.02■□□□□ 0.8
LAMA1P25391 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
LAMA1P25391 TERF1P1-201ENST00000311003 1181 ntBASIC20.02■□□□□ 0.8
LAMA1P25391 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LAMA1P25391 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.02■□□□□ 0.8
LAMA1P25391 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LAMA1P25391 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LAMA1P25391 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LAMA1P25391 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LAMA1P25391 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LAMA1P25391 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.02■□□□□ 0.8
LAMA1P25391 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LAMA1P25391 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
LAMA1P25391 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.02■□□□□ 0.8
LAMA1P25391 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
LAMA1P25391 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.01■□□□□ 0.79
LAMA1P25391 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LAMA1P25391 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LAMA1P25391 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.01■□□□□ 0.79
LAMA1P25391 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LAMA1P25391 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LAMA1P25391 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.01■□□□□ 0.79
LAMA1P25391 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
LAMA1P25391 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMA1P25391 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LAMA1P25391 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMA1P25391 AC127496.7-201ENST00000625110 1798 ntBASIC20.01■□□□□ 0.79
LAMA1P25391 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.01■□□□□ 0.79
LAMA1P25391 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.01■□□□□ 0.79
LAMA1P25391 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LAMA1P25391 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.01■□□□□ 0.79
LAMA1P25391 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMA1P25391 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMA1P25391 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LAMA1P25391 AC079598.2-202ENST00000546624 1451 ntBASIC20.01■□□□□ 0.79
LAMA1P25391 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMA1P25391 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMA1P25391 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LAMA1P25391 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LAMA1P25391 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LAMA1P25391 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LAMA1P25391 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20■□□□□ 0.79
LAMA1P25391 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LAMA1P25391 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20■□□□□ 0.79
LAMA1P25391 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20■□□□□ 0.79
LAMA1P25391 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20■□□□□ 0.79
LAMA1P25391 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20■□□□□ 0.79
LAMA1P25391 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20■□□□□ 0.79
LAMA1P25391 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20■□□□□ 0.79
LAMA1P25391 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20■□□□□ 0.79
LAMA1P25391 KRT18P22-201ENST00000402024 1347 ntBASIC20■□□□□ 0.79
LAMA1P25391 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LAMA1P25391 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20■□□□□ 0.79
LAMA1P25391 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20■□□□□ 0.79
LAMA1P25391 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20■□□□□ 0.79
LAMA1P25391 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20■□□□□ 0.79
LAMA1P25391 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20■□□□□ 0.79
LAMA1P25391 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
LAMA1P25391 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
LAMA1P25391 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms