Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL8A2P25067 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL8A2P25067 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL8A2P25067 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL8A2P25067 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL8A2P25067 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.17■□□□□ 0.34
COL8A2P25067 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL8A2P25067 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COL8A2P25067 AP003097.1-201ENST00000530657 1135 ntBASIC17.17■□□□□ 0.34
COL8A2P25067 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.17■□□□□ 0.34
COL8A2P25067 AC008403.3-201ENST00000598924 454 ntBASIC17.17■□□□□ 0.34
COL8A2P25067 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.17■□□□□ 0.34
COL8A2P25067 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL8A2P25067 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL8A2P25067 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL8A2P25067 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COL8A2P25067 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
COL8A2P25067 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL8A2P25067 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL8A2P25067 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL8A2P25067 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
COL8A2P25067 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL8A2P25067 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.16■□□□□ 0.34
COL8A2P25067 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COL8A2P25067 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL8A2P25067 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL8A2P25067 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
COL8A2P25067 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.16■□□□□ 0.34
COL8A2P25067 AC128676.1-201ENST00000454392 318 ntBASIC17.16■□□□□ 0.34
COL8A2P25067 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL8A2P25067 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.16■□□□□ 0.34
COL8A2P25067 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.16■□□□□ 0.34
COL8A2P25067 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.16■□□□□ 0.34
COL8A2P25067 AC066615.1-201ENST00000640911 628 ntBASIC17.16■□□□□ 0.34
COL8A2P25067 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL8A2P25067 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COL8A2P25067 AF106564.1-201ENST00000607058 2553 ntBASIC17.16■□□□□ 0.34
COL8A2P25067 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.15■□□□□ 0.34
COL8A2P25067 AC027702.1-201ENST00000563810 1770 ntBASIC17.15■□□□□ 0.34
COL8A2P25067 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL8A2P25067 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL8A2P25067 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL8A2P25067 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
COL8A2P25067 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL8A2P25067 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL8A2P25067 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
COL8A2P25067 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COL8A2P25067 UNC93B4-201ENST00000505679 747 ntBASIC17.15■□□□□ 0.34
COL8A2P25067 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COL8A2P25067 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.15■□□□□ 0.34
COL8A2P25067 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COL8A2P25067 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.14■□□□□ 0.34
COL8A2P25067 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
COL8A2P25067 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
COL8A2P25067 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
COL8A2P25067 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.14■□□□□ 0.33
COL8A2P25067 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
COL8A2P25067 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
COL8A2P25067 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
COL8A2P25067 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.14■□□□□ 0.33
COL8A2P25067 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.14■□□□□ 0.33
COL8A2P25067 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
COL8A2P25067 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.14■□□□□ 0.33
COL8A2P25067 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.14■□□□□ 0.33
COL8A2P25067 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.14■□□□□ 0.33
COL8A2P25067 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
COL8A2P25067 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
COL8A2P25067 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL8A2P25067 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.13■□□□□ 0.33
COL8A2P25067 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
COL8A2P25067 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL8A2P25067 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.13■□□□□ 0.33
COL8A2P25067 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL8A2P25067 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL8A2P25067 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL8A2P25067 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL8A2P25067 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL8A2P25067 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.13■□□□□ 0.33
COL8A2P25067 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
COL8A2P25067 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
COL8A2P25067 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL8A2P25067 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.13■□□□□ 0.33
COL8A2P25067 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.13■□□□□ 0.33
COL8A2P25067 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL8A2P25067 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.13■□□□□ 0.33
COL8A2P25067 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.13■□□□□ 0.33
COL8A2P25067 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms