Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.28■□□□□ 0.68
MMP11P24347 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.28■□□□□ 0.68
MMP11P24347 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
MMP11P24347 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.28■□□□□ 0.68
MMP11P24347 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP11P24347 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.28■□□□□ 0.68
MMP11P24347 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP11P24347 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP11P24347 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP11P24347 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP11P24347 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP11P24347 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP11P24347 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP11P24347 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP11P24347 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP11P24347 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP11P24347 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP11P24347 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP11P24347 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP11P24347 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP11P24347 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.27■□□□□ 0.68
MMP11P24347 KRT18P29-201ENST00000397031 1267 ntBASIC19.27■□□□□ 0.68
MMP11P24347 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MMP11P24347 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP11P24347 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.27■□□□□ 0.68
MMP11P24347 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MMP11P24347 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MMP11P24347 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
MMP11P24347 CYP21A1P-202ENST00000354927 1481 ntBASIC19.27■□□□□ 0.67
MMP11P24347 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MMP11P24347 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
MMP11P24347 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MMP11P24347 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP11P24347 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MMP11P24347 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MMP11P24347 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP11P24347 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP11P24347 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.26■□□□□ 0.67
MMP11P24347 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP11P24347 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP11P24347 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP11P24347 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP11P24347 ESRRAP1-201ENST00000400596 1257 ntBASIC19.26■□□□□ 0.67
MMP11P24347 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.26■□□□□ 0.67
MMP11P24347 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MMP11P24347 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.26■□□□□ 0.67
MMP11P24347 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MMP11P24347 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP11P24347 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.26■□□□□ 0.67
MMP11P24347 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP11P24347 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP11P24347 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP11P24347 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.26■□□□□ 0.67
MMP11P24347 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.26■□□□□ 0.67
MMP11P24347 FEM1AP1-201ENST00000431297 1995 ntBASIC19.26■□□□□ 0.67
MMP11P24347 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MMP11P24347 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP11P24347 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.25■□□□□ 0.67
MMP11P24347 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP11P24347 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MMP11P24347 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP11P24347 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP11P24347 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP11P24347 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
MMP11P24347 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP11P24347 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP11P24347 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MMP11P24347 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP11P24347 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP11P24347 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP11P24347 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
MMP11P24347 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP11P24347 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MMP11P24347 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.25■□□□□ 0.67
MMP11P24347 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP11P24347 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP11P24347 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP11P24347 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP11P24347 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.25■□□□□ 0.67
MMP11P24347 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP11P24347 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP11P24347 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP11P24347 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
MMP11P24347 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP11P24347 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MMP11P24347 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.25■□□□□ 0.67
MMP11P24347 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP11P24347 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
MMP11P24347 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MMP11P24347 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP11P24347 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP11P24347 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP11P24347 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MMP11P24347 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MMP11P24347 UNC93B5-201ENST00000530315 699 ntBASIC19.24■□□□□ 0.67
MMP11P24347 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MMP11P24347 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MMP11P24347 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
MMP11P24347 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP11P24347 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms