Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.52■□□□□ 0.71
CAPN3P20807 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CAPN3P20807 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.52■□□□□ 0.71
CAPN3P20807 SMG8-203ENST00000578922 2178 ntBASIC19.51■□□□□ 0.71
CAPN3P20807 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CAPN3P20807 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN3P20807 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN3P20807 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN3P20807 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.51■□□□□ 0.71
CAPN3P20807 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CAPN3P20807 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.51■□□□□ 0.71
CAPN3P20807 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CAPN3P20807 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
CAPN3P20807 AC012414.1-201ENST00000556676 535 ntBASIC19.51■□□□□ 0.71
CAPN3P20807 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.51■□□□□ 0.71
CAPN3P20807 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.51■□□□□ 0.71
CAPN3P20807 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN3P20807 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CAPN3P20807 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN3P20807 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.51■□□□□ 0.71
CAPN3P20807 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.51■□□□□ 0.71
CAPN3P20807 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN3P20807 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN3P20807 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN3P20807 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN3P20807 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN3P20807 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN3P20807 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPN3P20807 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CAPN3P20807 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.5■□□□□ 0.71
CAPN3P20807 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.5■□□□□ 0.71
CAPN3P20807 CCDC92B-201ENST00000575506 885 ntBASIC19.5■□□□□ 0.71
CAPN3P20807 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.5■□□□□ 0.71
CAPN3P20807 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CAPN3P20807 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.5■□□□□ 0.71
CAPN3P20807 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CAPN3P20807 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.5■□□□□ 0.71
CAPN3P20807 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CAPN3P20807 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.5■□□□□ 0.71
CAPN3P20807 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.5■□□□□ 0.71
CAPN3P20807 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN3P20807 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.49■□□□□ 0.71
CAPN3P20807 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.49■□□□□ 0.71
CAPN3P20807 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN3P20807 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN3P20807 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN3P20807 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.49■□□□□ 0.71
CAPN3P20807 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CAPN3P20807 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN3P20807 POU5F1P4-201ENST00000413175 1085 ntBASIC19.49■□□□□ 0.71
CAPN3P20807 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN3P20807 AC008175.2-201ENST00000612840 297 ntBASIC19.49■□□□□ 0.71
CAPN3P20807 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.49■□□□□ 0.71
CAPN3P20807 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CAPN3P20807 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CAPN3P20807 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.49■□□□□ 0.71
CAPN3P20807 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN3P20807 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN3P20807 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN3P20807 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN3P20807 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CAPN3P20807 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.49■□□□□ 0.71
CAPN3P20807 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAPN3P20807 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN3P20807 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CAPN3P20807 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN3P20807 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN3P20807 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN3P20807 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.48■□□□□ 0.71
CAPN3P20807 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.48■□□□□ 0.71
CAPN3P20807 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN3P20807 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN3P20807 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN3P20807 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CAPN3P20807 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CAPN3P20807 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN3P20807 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN3P20807 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPN3P20807 AC116562.4-201ENST00000641316 2276 ntBASIC19.48■□□□□ 0.71
CAPN3P20807 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN3P20807 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN3P20807 LINC02228-203ENST00000641970 1355 ntBASIC19.47■□□□□ 0.71
CAPN3P20807 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAPN3P20807 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CAPN3P20807 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms