Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF1P18846 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATF1P18846 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATF1P18846 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATF1P18846 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF1P18846 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF1P18846 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF1P18846 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF1P18846 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
ATF1P18846 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF1P18846 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATF1P18846 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATF1P18846 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF1P18846 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATF1P18846 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF1P18846 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATF1P18846 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.8■□□□□ 0.44
ATF1P18846 POU5F1P4-201ENST00000413175 1085 ntBASIC17.8■□□□□ 0.44
ATF1P18846 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.8■□□□□ 0.44
ATF1P18846 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF1P18846 AC079140.4-201ENST00000507448 529 ntBASIC17.8■□□□□ 0.44
ATF1P18846 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.8■□□□□ 0.44
ATF1P18846 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.8■□□□□ 0.44
ATF1P18846 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ATF1P18846 MIR6084-201ENST00000622012 110 ntBASIC17.8■□□□□ 0.44
ATF1P18846 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATF1P18846 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF1P18846 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF1P18846 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ATF1P18846 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.8■□□□□ 0.44
ATF1P18846 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
ATF1P18846 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF1P18846 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF1P18846 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATF1P18846 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ATF1P18846 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.79■□□□□ 0.44
ATF1P18846 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.79■□□□□ 0.44
ATF1P18846 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.79■□□□□ 0.44
ATF1P18846 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
ATF1P18846 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ATF1P18846 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.79■□□□□ 0.44
ATF1P18846 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.79■□□□□ 0.44
ATF1P18846 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.79■□□□□ 0.44
ATF1P18846 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.79■□□□□ 0.44
ATF1P18846 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.79■□□□□ 0.44
ATF1P18846 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ATF1P18846 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.79■□□□□ 0.44
ATF1P18846 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ATF1P18846 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATF1P18846 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ATF1P18846 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATF1P18846 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATF1P18846 KRT87P-202ENST00000534226 1464 ntBASIC17.78■□□□□ 0.44
ATF1P18846 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ATF1P18846 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATF1P18846 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATF1P18846 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.78■□□□□ 0.44
ATF1P18846 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.78■□□□□ 0.44
ATF1P18846 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.78■□□□□ 0.44
ATF1P18846 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATF1P18846 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATF1P18846 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATF1P18846 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ATF1P18846 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.78■□□□□ 0.44
ATF1P18846 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
ATF1P18846 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.78■□□□□ 0.44
ATF1P18846 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.78■□□□□ 0.44
ATF1P18846 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATF1P18846 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATF1P18846 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.78■□□□□ 0.44
ATF1P18846 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATF1P18846 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATF1P18846 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ATF1P18846 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATF1P18846 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATF1P18846 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
ATF1P18846 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATF1P18846 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATF1P18846 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.77■□□□□ 0.44
ATF1P18846 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATF1P18846 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.77■□□□□ 0.44
ATF1P18846 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.77■□□□□ 0.44
ATF1P18846 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.77■□□□□ 0.44
ATF1P18846 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATF1P18846 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms