Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.13■■□□□ 1.61
COL11A2P13942 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.13■■□□□ 1.61
COL11A2P13942 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
COL11A2P13942 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.13■■□□□ 1.61
COL11A2P13942 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL11A2P13942 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
COL11A2P13942 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
COL11A2P13942 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL11A2P13942 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.12■■□□□ 1.61
COL11A2P13942 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.12■■□□□ 1.61
COL11A2P13942 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL11A2P13942 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL11A2P13942 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC25.12■■□□□ 1.61
COL11A2P13942 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL11A2P13942 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.12■■□□□ 1.61
COL11A2P13942 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.12■■□□□ 1.61
COL11A2P13942 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL11A2P13942 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL11A2P13942 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL11A2P13942 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL11A2P13942 C9orf163-202ENST00000624034 2573 ntBASIC25.11■■□□□ 1.61
COL11A2P13942 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
COL11A2P13942 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.11■■□□□ 1.61
COL11A2P13942 UNC93B2-201ENST00000285383 730 ntBASIC25.11■■□□□ 1.61
COL11A2P13942 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL11A2P13942 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
COL11A2P13942 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL11A2P13942 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL11A2P13942 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.11■■□□□ 1.61
COL11A2P13942 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL11A2P13942 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC25.1■■□□□ 1.61
COL11A2P13942 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC25.1■■□□□ 1.61
COL11A2P13942 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.1■■□□□ 1.61
COL11A2P13942 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL11A2P13942 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.1■■□□□ 1.61
COL11A2P13942 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL11A2P13942 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
COL11A2P13942 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
COL11A2P13942 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.09■■□□□ 1.61
COL11A2P13942 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC25.09■■□□□ 1.61
COL11A2P13942 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL11A2P13942 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL11A2P13942 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL11A2P13942 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.09■■□□□ 1.61
COL11A2P13942 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL11A2P13942 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.09■■□□□ 1.61
COL11A2P13942 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25.09■■□□□ 1.61
COL11A2P13942 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.09■■□□□ 1.61
COL11A2P13942 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.08■■□□□ 1.61
COL11A2P13942 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.08■■□□□ 1.61
COL11A2P13942 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL11A2P13942 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL11A2P13942 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL11A2P13942 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL11A2P13942 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL11A2P13942 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
COL11A2P13942 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.08■■□□□ 1.61
COL11A2P13942 SLC25A3P1-201ENST00000443844 931 ntBASIC25.08■■□□□ 1.61
COL11A2P13942 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.08■■□□□ 1.61
COL11A2P13942 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC25.08■■□□□ 1.61
COL11A2P13942 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
COL11A2P13942 NME3-204ENST00000563498 920 ntTSL 2 BASIC25.08■■□□□ 1.61
COL11A2P13942 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.08■■□□□ 1.61
COL11A2P13942 GLDC-219ENST00000640208 420 ntTSL 2 BASIC25.08■■□□□ 1.61
COL11A2P13942 CYP2D8P-201ENST00000433633 1490 ntBASIC25.08■■□□□ 1.6
COL11A2P13942 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
COL11A2P13942 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC25.08■■□□□ 1.6
COL11A2P13942 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL11A2P13942 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC25.07■■□□□ 1.6
COL11A2P13942 AC023632.3-201ENST00000521633 145 ntBASIC25.07■■□□□ 1.6
COL11A2P13942 NT5C-211ENST00000582170 653 ntTSL 3 BASIC25.07■■□□□ 1.6
COL11A2P13942 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL11A2P13942 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL11A2P13942 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.07■■□□□ 1.6
COL11A2P13942 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.07■■□□□ 1.6
COL11A2P13942 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL11A2P13942 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.07■■□□□ 1.6
COL11A2P13942 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL11A2P13942 NIFKP9-201ENST00000419265 221 ntBASIC25.06■■□□□ 1.6
COL11A2P13942 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.06■■□□□ 1.6
COL11A2P13942 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL11A2P13942 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.06■■□□□ 1.6
COL11A2P13942 AC073195.1-201ENST00000607241 877 ntBASIC25.06■■□□□ 1.6
COL11A2P13942 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.06■■□□□ 1.6
COL11A2P13942 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.06■■□□□ 1.6
COL11A2P13942 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
COL11A2P13942 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.06■■□□□ 1.6
COL11A2P13942 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC25.06■■□□□ 1.6
COL11A2P13942 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL11A2P13942 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC25.06■■□□□ 1.6
COL11A2P13942 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
COL11A2P13942 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.06■■□□□ 1.6
COL11A2P13942 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.05■■□□□ 1.6
COL11A2P13942 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL11A2P13942 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL11A2P13942 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL11A2P13942 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.05■■□□□ 1.6
COL11A2P13942 MIR1238-201ENST00000408483 83 ntBASIC25.05■■□□□ 1.6
COL11A2P13942 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL11A2P13942 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms