Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH1P12830 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH1P12830 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH1P12830 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH1P12830 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH1P12830 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDH1P12830 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.78■□□□□ 0.76
CDH1P12830 CYP2T1P-201ENST00000432607 1285 ntBASIC19.78■□□□□ 0.76
CDH1P12830 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH1P12830 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH1P12830 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.78■□□□□ 0.76
CDH1P12830 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.78■□□□□ 0.76
CDH1P12830 AL162412.1-201ENST00000567129 965 ntBASIC19.78■□□□□ 0.76
CDH1P12830 FAM21FP-204ENST00000608637 956 ntBASIC19.78■□□□□ 0.76
CDH1P12830 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH1P12830 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH1P12830 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH1P12830 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH1P12830 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH1P12830 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH1P12830 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH1P12830 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDH1P12830 AC027702.1-201ENST00000563810 1770 ntBASIC19.78■□□□□ 0.76
CDH1P12830 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH1P12830 FP700111.2-201ENST00000619190 1892 ntBASIC19.77■□□□□ 0.76
CDH1P12830 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH1P12830 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH1P12830 AC007952.6-201ENST00000573168 2673 ntBASIC19.77■□□□□ 0.76
CDH1P12830 AC003957.1-201ENST00000625108 2673 ntBASIC19.77■□□□□ 0.76
CDH1P12830 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH1P12830 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH1P12830 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH1P12830 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.77■□□□□ 0.76
CDH1P12830 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH1P12830 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH1P12830 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CDH1P12830 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.77■□□□□ 0.76
CDH1P12830 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH1P12830 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH1P12830 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CDH1P12830 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDH1P12830 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.77■□□□□ 0.75
CDH1P12830 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
CDH1P12830 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
CDH1P12830 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
CDH1P12830 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH1P12830 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH1P12830 AC007225.1-201ENST00000566331 1836 ntBASIC19.76■□□□□ 0.75
CDH1P12830 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH1P12830 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH1P12830 AC073314.1-201ENST00000568729 2216 ntBASIC19.76■□□□□ 0.75
CDH1P12830 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH1P12830 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH1P12830 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH1P12830 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH1P12830 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH1P12830 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH1P12830 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH1P12830 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.76■□□□□ 0.75
CDH1P12830 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH1P12830 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH1P12830 AC005181.1-201ENST00000604782 1256 ntBASIC19.76■□□□□ 0.75
CDH1P12830 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CDH1P12830 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CDH1P12830 AL391422.3-201ENST00000603791 2761 ntBASIC19.76■□□□□ 0.75
CDH1P12830 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH1P12830 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH1P12830 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH1P12830 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH1P12830 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CDH1P12830 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH1P12830 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CDH1P12830 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDH1P12830 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH1P12830 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.75■□□□□ 0.75
CDH1P12830 AC026185.1-201ENST00000445748 174 ntBASIC19.75■□□□□ 0.75
CDH1P12830 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH1P12830 RAP2CP1-201ENST00000605103 478 ntBASIC19.75■□□□□ 0.75
CDH1P12830 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH1P12830 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CDH1P12830 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH1P12830 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH1P12830 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CDH1P12830 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CDH1P12830 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH1P12830 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH1P12830 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.75■□□□□ 0.75
CDH1P12830 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH1P12830 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDH1P12830 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CDH1P12830 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.74■□□□□ 0.75
CDH1P12830 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms