Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CGB3P0DN86 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CGB3P0DN86 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.72■□□□□ 0.27
CGB3P0DN86 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.71■□□□□ 0.27
CGB3P0DN86 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.71■□□□□ 0.27
CGB3P0DN86 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.71■□□□□ 0.27
CGB3P0DN86 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.71■□□□□ 0.27
CGB3P0DN86 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.71■□□□□ 0.27
CGB3P0DN86 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.71■□□□□ 0.27
CGB3P0DN86 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.71■□□□□ 0.27
CGB3P0DN86 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.71■□□□□ 0.27
CGB3P0DN86 CYP2T3P-201ENST00000601990 817 ntBASIC16.71■□□□□ 0.27
CGB3P0DN86 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CGB3P0DN86 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.71■□□□□ 0.27
CGB3P0DN86 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.71■□□□□ 0.27
CGB3P0DN86 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.71■□□□□ 0.27
CGB3P0DN86 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CGB3P0DN86 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB3P0DN86 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CGB3P0DN86 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CGB3P0DN86 AC099778.1-201ENST00000568593 1911 ntBASIC16.7■□□□□ 0.26
CGB3P0DN86 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CGB3P0DN86 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CGB3P0DN86 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.7■□□□□ 0.26
CGB3P0DN86 KRT18P68-201ENST00000392293 1000 ntBASIC16.7■□□□□ 0.26
CGB3P0DN86 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.7■□□□□ 0.26
CGB3P0DN86 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CGB3P0DN86 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.7■□□□□ 0.26
CGB3P0DN86 AC133552.2-202ENST00000575694 574 ntBASIC16.7■□□□□ 0.26
CGB3P0DN86 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.7■□□□□ 0.26
CGB3P0DN86 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.7■□□□□ 0.26
CGB3P0DN86 AC005181.1-201ENST00000604782 1256 ntBASIC16.7■□□□□ 0.26
CGB3P0DN86 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CGB3P0DN86 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CGB3P0DN86 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.7■□□□□ 0.26
CGB3P0DN86 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CGB3P0DN86 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.7■□□□□ 0.26
CGB3P0DN86 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CGB3P0DN86 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CGB3P0DN86 AC010980.2-201ENST00000587099 1412 ntBASIC16.7■□□□□ 0.26
CGB3P0DN86 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB3P0DN86 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CGB3P0DN86 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.69■□□□□ 0.26
CGB3P0DN86 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.69■□□□□ 0.26
CGB3P0DN86 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.69■□□□□ 0.26
CGB3P0DN86 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CGB3P0DN86 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB3P0DN86 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.69■□□□□ 0.26
CGB3P0DN86 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.69■□□□□ 0.26
CGB3P0DN86 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB3P0DN86 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.69■□□□□ 0.26
CGB3P0DN86 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CGB3P0DN86 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.69■□□□□ 0.26
CGB3P0DN86 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.69■□□□□ 0.26
CGB3P0DN86 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.69■□□□□ 0.26
CGB3P0DN86 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.69■□□□□ 0.26
CGB3P0DN86 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.69■□□□□ 0.26
CGB3P0DN86 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB3P0DN86 AC008694.1-202ENST00000636953 945 ntBASIC16.69■□□□□ 0.26
CGB3P0DN86 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CGB3P0DN86 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.69■□□□□ 0.26
CGB3P0DN86 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CGB3P0DN86 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.69■□□□□ 0.26
CGB3P0DN86 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB3P0DN86 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB3P0DN86 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CGB3P0DN86 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CGB3P0DN86 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CGB3P0DN86 SMG8-203ENST00000578922 2178 ntBASIC16.68■□□□□ 0.26
CGB3P0DN86 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
CGB3P0DN86 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CGB3P0DN86 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.68■□□□□ 0.26
CGB3P0DN86 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB3P0DN86 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.68■□□□□ 0.26
CGB3P0DN86 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB3P0DN86 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CGB3P0DN86 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.68■□□□□ 0.26
CGB3P0DN86 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB3P0DN86 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB3P0DN86 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CGB3P0DN86 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.68■□□□□ 0.26
CGB3P0DN86 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CGB3P0DN86 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CGB3P0DN86 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CGB3P0DN86 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms