Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HOXC6P09630 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
HOXC6P09630 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HOXC6P09630 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HOXC6P09630 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.1■■□□□ 1.29
HOXC6P09630 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
HOXC6P09630 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.1■■□□□ 1.29
HOXC6P09630 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.1■■□□□ 1.29
HOXC6P09630 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HOXC6P09630 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
HOXC6P09630 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HOXC6P09630 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HOXC6P09630 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HOXC6P09630 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HOXC6P09630 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HOXC6P09630 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HOXC6P09630 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HOXC6P09630 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HOXC6P09630 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HOXC6P09630 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.09■■□□□ 1.29
HOXC6P09630 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.09■■□□□ 1.29
HOXC6P09630 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.09■■□□□ 1.29
HOXC6P09630 AL353708.3-201ENST00000610272 989 ntBASIC23.09■■□□□ 1.29
HOXC6P09630 AL121829.2-201ENST00000620908 328 ntBASIC23.09■■□□□ 1.29
HOXC6P09630 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
HOXC6P09630 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HOXC6P09630 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HOXC6P09630 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HOXC6P09630 EP400NL-214ENST00000641289 2402 ntBASIC23.09■■□□□ 1.29
HOXC6P09630 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HOXC6P09630 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
HOXC6P09630 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HOXC6P09630 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
HOXC6P09630 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HOXC6P09630 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.08■■□□□ 1.29
HOXC6P09630 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC23.08■■□□□ 1.29
HOXC6P09630 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.08■■□□□ 1.29
HOXC6P09630 AC026471.5-201ENST00000615068 467 ntBASIC23.08■■□□□ 1.29
HOXC6P09630 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HOXC6P09630 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.29
HOXC6P09630 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HOXC6P09630 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HOXC6P09630 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HOXC6P09630 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HOXC6P09630 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
HOXC6P09630 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HOXC6P09630 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HOXC6P09630 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.07■■□□□ 1.28
HOXC6P09630 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
HOXC6P09630 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HOXC6P09630 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HOXC6P09630 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
HOXC6P09630 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.07■■□□□ 1.28
HOXC6P09630 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
HOXC6P09630 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.07■■□□□ 1.28
HOXC6P09630 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HOXC6P09630 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
HOXC6P09630 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
HOXC6P09630 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
HOXC6P09630 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.06■■□□□ 1.28
HOXC6P09630 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HOXC6P09630 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
HOXC6P09630 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
HOXC6P09630 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.06■■□□□ 1.28
HOXC6P09630 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
HOXC6P09630 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.06■■□□□ 1.28
HOXC6P09630 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.06■■□□□ 1.28
HOXC6P09630 AP003071.4-201ENST00000562276 1284 ntBASIC23.06■■□□□ 1.28
HOXC6P09630 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HOXC6P09630 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HOXC6P09630 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HOXC6P09630 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
HOXC6P09630 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.05■■□□□ 1.28
HOXC6P09630 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.05■■□□□ 1.28
HOXC6P09630 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.05■■□□□ 1.28
HOXC6P09630 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HOXC6P09630 AC023632.3-201ENST00000521633 145 ntBASIC23.05■■□□□ 1.28
HOXC6P09630 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
HOXC6P09630 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.05■■□□□ 1.28
HOXC6P09630 AF186192.3-201ENST00000583427 947 ntBASIC23.05■■□□□ 1.28
HOXC6P09630 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.05■■□□□ 1.28
HOXC6P09630 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HOXC6P09630 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.05■■□□□ 1.28
HOXC6P09630 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.05■■□□□ 1.28
HOXC6P09630 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.05■■□□□ 1.28
HOXC6P09630 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HOXC6P09630 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HOXC6P09630 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HOXC6P09630 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
HOXC6P09630 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.04■■□□□ 1.28
HOXC6P09630 KRT16P5-201ENST00000455284 522 ntBASIC23.04■■□□□ 1.28
HOXC6P09630 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.04■■□□□ 1.28
HOXC6P09630 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.04■■□□□ 1.28
HOXC6P09630 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.04■■□□□ 1.28
HOXC6P09630 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.04■■□□□ 1.28
HOXC6P09630 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.04■■□□□ 1.28
HOXC6P09630 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HOXC6P09630 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
HOXC6P09630 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.04■■□□□ 1.28
HOXC6P09630 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms