Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APOA4P06727 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
APOA4P06727 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
APOA4P06727 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.34■□□□□ 0.85
APOA4P06727 AL512408.1-201ENST00000569378 2000 ntBASIC20.34■□□□□ 0.85
APOA4P06727 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APOA4P06727 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
APOA4P06727 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APOA4P06727 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APOA4P06727 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.34■□□□□ 0.85
APOA4P06727 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
APOA4P06727 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
APOA4P06727 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
APOA4P06727 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.33■□□□□ 0.85
APOA4P06727 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
APOA4P06727 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
APOA4P06727 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.33■□□□□ 0.85
APOA4P06727 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
APOA4P06727 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
APOA4P06727 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
APOA4P06727 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.33■□□□□ 0.85
APOA4P06727 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
APOA4P06727 AC011767.1-201ENST00000617410 1153 ntBASIC20.33■□□□□ 0.85
APOA4P06727 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
APOA4P06727 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.33■□□□□ 0.84
APOA4P06727 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
APOA4P06727 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.33■□□□□ 0.84
APOA4P06727 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
APOA4P06727 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
APOA4P06727 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
APOA4P06727 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
APOA4P06727 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
APOA4P06727 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
APOA4P06727 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
APOA4P06727 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
APOA4P06727 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.32■□□□□ 0.84
APOA4P06727 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.32■□□□□ 0.84
APOA4P06727 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
APOA4P06727 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.32■□□□□ 0.84
APOA4P06727 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.32■□□□□ 0.84
APOA4P06727 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.32■□□□□ 0.84
APOA4P06727 AC013268.1-206ENST00000638368 961 ntBASIC20.32■□□□□ 0.84
APOA4P06727 AC112229.1-201ENST00000639295 961 ntBASIC20.32■□□□□ 0.84
APOA4P06727 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APOA4P06727 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.32■□□□□ 0.84
APOA4P06727 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
APOA4P06727 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APOA4P06727 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.31■□□□□ 0.84
APOA4P06727 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APOA4P06727 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
APOA4P06727 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
APOA4P06727 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APOA4P06727 AC091799.1-201ENST00000422823 811 ntBASIC20.31■□□□□ 0.84
APOA4P06727 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APOA4P06727 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APOA4P06727 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
APOA4P06727 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
APOA4P06727 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
APOA4P06727 AL137784.2-201ENST00000607332 1000 ntBASIC20.31■□□□□ 0.84
APOA4P06727 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
APOA4P06727 AC092720.2-201ENST00000602388 1665 ntBASIC20.31■□□□□ 0.84
APOA4P06727 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
APOA4P06727 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.31■□□□□ 0.84
APOA4P06727 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
APOA4P06727 AC116050.2-201ENST00000612102 1779 ntBASIC20.31■□□□□ 0.84
APOA4P06727 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APOA4P06727 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.3■□□□□ 0.84
APOA4P06727 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
APOA4P06727 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.3■□□□□ 0.84
APOA4P06727 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
APOA4P06727 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
APOA4P06727 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
APOA4P06727 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
APOA4P06727 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APOA4P06727 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.3■□□□□ 0.84
APOA4P06727 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.3■□□□□ 0.84
APOA4P06727 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.3■□□□□ 0.84
APOA4P06727 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.3■□□□□ 0.84
APOA4P06727 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
APOA4P06727 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
APOA4P06727 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APOA4P06727 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
APOA4P06727 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
APOA4P06727 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APOA4P06727 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APOA4P06727 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
APOA4P06727 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APOA4P06727 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.29■□□□□ 0.84
APOA4P06727 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
APOA4P06727 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.29■□□□□ 0.84
APOA4P06727 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
APOA4P06727 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APOA4P06727 CDV3P1-201ENST00000471403 739 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms