Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRAP04437 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRAP04437 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TCRAP04437 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TCRAP04437 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.43■□□□□ 0.06
TCRAP04437 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 AC131281.2-201ENST00000520478 145 ntBASIC15.43■□□□□ 0.06
TCRAP04437 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.43■□□□□ 0.06
TCRAP04437 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.43■□□□□ 0.06
TCRAP04437 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.43■□□□□ 0.06
TCRAP04437 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.43■□□□□ 0.06
TCRAP04437 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TCRAP04437 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TCRAP04437 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRAP04437 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRAP04437 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRAP04437 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TCRAP04437 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.42■□□□□ 0.06
TCRAP04437 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRAP04437 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TCRAP04437 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.42■□□□□ 0.06
TCRAP04437 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
TCRAP04437 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRAP04437 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRAP04437 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.42■□□□□ 0.06
TCRAP04437 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRAP04437 AL356441.2-201ENST00000443009 864 ntBASIC15.42■□□□□ 0.06
TCRAP04437 AC008175.2-201ENST00000612840 297 ntBASIC15.42■□□□□ 0.06
TCRAP04437 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TCRAP04437 MIR2861-201ENST00000636310 90 ntBASIC15.42■□□□□ 0.06
TCRAP04437 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRAP04437 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRAP04437 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.42■□□□□ 0.06
TCRAP04437 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRAP04437 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRAP04437 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCRAP04437 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.41■□□□□ 0.06
TCRAP04437 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TCRAP04437 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRAP04437 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRAP04437 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRAP04437 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRAP04437 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRAP04437 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TCRAP04437 POU5F1P4-201ENST00000413175 1085 ntBASIC15.41■□□□□ 0.06
TCRAP04437 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCRAP04437 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.41■□□□□ 0.06
TCRAP04437 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.41■□□□□ 0.06
TCRAP04437 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRAP04437 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCRAP04437 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCRAP04437 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCRAP04437 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
TCRAP04437 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.4■□□□□ 0.06
TCRAP04437 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.4■□□□□ 0.06
TCRAP04437 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TCRAP04437 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.4■□□□□ 0.06
TCRAP04437 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.4■□□□□ 0.06
TCRAP04437 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.4■□□□□ 0.06
TCRAP04437 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.4■□□□□ 0.06
TCRAP04437 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.4■□□□□ 0.06
TCRAP04437 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRAP04437 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.39■□□□□ 0.05
TCRAP04437 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRAP04437 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms