Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.32■■□□□ 1
TRUB2O95900 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRUB2O95900 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.32■■□□□ 1
TRUB2O95900 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.32■■□□□ 1
TRUB2O95900 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.32■■□□□ 1
TRUB2O95900 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRUB2O95900 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRUB2O95900 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRUB2O95900 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
TRUB2O95900 MIPEPP3-201ENST00000412105 444 ntBASIC21.32■■□□□ 1
TRUB2O95900 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.32■■□□□ 1
TRUB2O95900 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
TRUB2O95900 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
TRUB2O95900 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRUB2O95900 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TRUB2O95900 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TRUB2O95900 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.32■■□□□ 1
TRUB2O95900 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.31■■□□□ 1
TRUB2O95900 AC087633.2-202ENST00000565166 1439 ntBASIC21.31■■□□□ 1
TRUB2O95900 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRUB2O95900 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRUB2O95900 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.31■■□□□ 1
TRUB2O95900 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
TRUB2O95900 BX276092.2-201ENST00000417668 665 ntBASIC21.31■■□□□ 1
TRUB2O95900 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.31■■□□□ 1
TRUB2O95900 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRUB2O95900 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
TRUB2O95900 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRUB2O95900 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.3■■□□□ 1
TRUB2O95900 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRUB2O95900 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRUB2O95900 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRUB2O95900 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRUB2O95900 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.3■■□□□ 1
TRUB2O95900 KRT18P68-201ENST00000392293 1000 ntBASIC21.3■■□□□ 1
TRUB2O95900 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.3■■□□□ 1
TRUB2O95900 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.3■■□□□ 1
TRUB2O95900 AL138781.1-201ENST00000566567 1274 ntBASIC21.3■■□□□ 1
TRUB2O95900 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.3■■□□□ 1
TRUB2O95900 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.3■■□□□ 1
TRUB2O95900 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.3■■□□□ 1
TRUB2O95900 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.3■■□□□ 1
TRUB2O95900 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.3■■□□□ 1
TRUB2O95900 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRUB2O95900 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.3■■□□□ 1
TRUB2O95900 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRUB2O95900 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRUB2O95900 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRUB2O95900 KRT17P1-201ENST00000399211 1546 ntBASIC21.29■■□□□ 1
TRUB2O95900 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.29■■□□□ 1
TRUB2O95900 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.29■■□□□ 1
TRUB2O95900 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRUB2O95900 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRUB2O95900 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRUB2O95900 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRUB2O95900 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRUB2O95900 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.29■■□□□ 1
TRUB2O95900 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
TRUB2O95900 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRUB2O95900 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.29■■□□□ 1
TRUB2O95900 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
TRUB2O95900 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.29■■□□□ 1
TRUB2O95900 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.29■■□□□ 1
TRUB2O95900 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRUB2O95900 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRUB2O95900 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRUB2O95900 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRUB2O95900 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRUB2O95900 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.29■■□□□ 1
TRUB2O95900 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRUB2O95900 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRUB2O95900 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRUB2O95900 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.28■■□□□ 1
TRUB2O95900 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRUB2O95900 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.28■■□□□ 1
TRUB2O95900 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.28■■□□□ 1
TRUB2O95900 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRUB2O95900 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.28■■□□□ 1
TRUB2O95900 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRUB2O95900 AL355802.2-201ENST00000402069 882 ntBASIC21.28■■□□□ 1
TRUB2O95900 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.28■■□□□ 1
TRUB2O95900 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.28■■□□□ 1
TRUB2O95900 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.28■■□□□ 1
TRUB2O95900 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.28■■□□□ 1
TRUB2O95900 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRUB2O95900 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
TRUB2O95900 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRUB2O95900 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.27■■□□□ 1
TRUB2O95900 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRUB2O95900 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.27■■□□□ 1
TRUB2O95900 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRUB2O95900 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRUB2O95900 PGM5P4-201ENST00000421970 445 ntBASIC21.27■■□□□ 1
TRUB2O95900 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.27■■□□□ 1
TRUB2O95900 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRUB2O95900 AC142086.2-201ENST00000569753 217 ntBASIC21.27■■□□□ 1
TRUB2O95900 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TRUB2O95900 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TRUB2O95900 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRUB2O95900 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms