Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDRT1O95170 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDRT1O95170 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.07■□□□□ 0.48
CDRT1O95170 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDRT1O95170 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDRT1O95170 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.07■□□□□ 0.48
CDRT1O95170 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDRT1O95170 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDRT1O95170 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDRT1O95170 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.07■□□□□ 0.48
CDRT1O95170 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.07■□□□□ 0.48
CDRT1O95170 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.07■□□□□ 0.48
CDRT1O95170 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.07■□□□□ 0.48
CDRT1O95170 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.07■□□□□ 0.48
CDRT1O95170 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.07■□□□□ 0.48
CDRT1O95170 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.07■□□□□ 0.48
CDRT1O95170 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDRT1O95170 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDRT1O95170 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDRT1O95170 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDRT1O95170 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDRT1O95170 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.07■□□□□ 0.48
CDRT1O95170 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDRT1O95170 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDRT1O95170 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.06■□□□□ 0.48
CDRT1O95170 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDRT1O95170 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDRT1O95170 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.06■□□□□ 0.48
CDRT1O95170 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CDRT1O95170 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDRT1O95170 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDRT1O95170 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDRT1O95170 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.06■□□□□ 0.48
CDRT1O95170 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDRT1O95170 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDRT1O95170 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDRT1O95170 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDRT1O95170 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDRT1O95170 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDRT1O95170 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDRT1O95170 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDRT1O95170 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.05■□□□□ 0.48
CDRT1O95170 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.05■□□□□ 0.48
CDRT1O95170 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 AC011484.1-201ENST00000377652 1995 ntBASIC18.05■□□□□ 0.48
CDRT1O95170 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.05■□□□□ 0.48
CDRT1O95170 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.05■□□□□ 0.48
CDRT1O95170 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CDRT1O95170 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDRT1O95170 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 AC120498.9-201ENST00000339021 3867 ntBASIC18.04■□□□□ 0.48
CDRT1O95170 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.04■□□□□ 0.48
CDRT1O95170 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 BX005040.4-201ENST00000637145 1518 ntBASIC18.04■□□□□ 0.48
CDRT1O95170 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.04■□□□□ 0.48
CDRT1O95170 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.04■□□□□ 0.48
CDRT1O95170 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDRT1O95170 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.04■□□□□ 0.48
CDRT1O95170 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CDRT1O95170 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.04■□□□□ 0.48
CDRT1O95170 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDRT1O95170 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.03■□□□□ 0.48
CDRT1O95170 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CDRT1O95170 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 AC005332.7-201ENST00000614046 2005 ntBASIC18.03■□□□□ 0.48
CDRT1O95170 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.03■□□□□ 0.48
CDRT1O95170 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDRT1O95170 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms