Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCAF4O95104 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAF4O95104 AC098818.2-201ENST00000564925 2320 ntBASIC16.57■□□□□ 0.24
SCAF4O95104 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAF4O95104 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SCAF4O95104 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAF4O95104 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAF4O95104 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCAF4O95104 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCAF4O95104 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAF4O95104 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SCAF4O95104 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAF4O95104 AC019069.1-201ENST00000610008 1333 ntBASIC16.57■□□□□ 0.24
SCAF4O95104 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCAF4O95104 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.57■□□□□ 0.24
SCAF4O95104 MIR939-201ENST00000401314 82 ntBASIC16.57■□□□□ 0.24
SCAF4O95104 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.57■□□□□ 0.24
SCAF4O95104 SUDS3P1-201ENST00000505831 966 ntBASIC16.57■□□□□ 0.24
SCAF4O95104 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.57■□□□□ 0.24
SCAF4O95104 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.57■□□□□ 0.24
SCAF4O95104 AL136967.2-201ENST00000623968 743 ntBASIC16.57■□□□□ 0.24
SCAF4O95104 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCAF4O95104 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SCAF4O95104 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCAF4O95104 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.57■□□□□ 0.24
SCAF4O95104 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.57■□□□□ 0.24
SCAF4O95104 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCAF4O95104 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCAF4O95104 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCAF4O95104 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SCAF4O95104 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCAF4O95104 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SCAF4O95104 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCAF4O95104 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.56■□□□□ 0.24
SCAF4O95104 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.56■□□□□ 0.24
SCAF4O95104 AC091305.1-201ENST00000479476 895 ntBASIC16.56■□□□□ 0.24
SCAF4O95104 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SCAF4O95104 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SCAF4O95104 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SCAF4O95104 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.56■□□□□ 0.24
SCAF4O95104 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCAF4O95104 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCAF4O95104 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.56■□□□□ 0.24
SCAF4O95104 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.56■□□□□ 0.24
SCAF4O95104 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCAF4O95104 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCAF4O95104 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SCAF4O95104 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.56■□□□□ 0.24
SCAF4O95104 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SCAF4O95104 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SCAF4O95104 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SCAF4O95104 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 RASA4CP-201ENST00000424092 1398 ntBASIC16.55■□□□□ 0.24
SCAF4O95104 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.55■□□□□ 0.24
SCAF4O95104 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.55■□□□□ 0.24
SCAF4O95104 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.55■□□□□ 0.24
SCAF4O95104 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.55■□□□□ 0.24
SCAF4O95104 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.55■□□□□ 0.24
SCAF4O95104 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SCAF4O95104 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.55■□□□□ 0.24
SCAF4O95104 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCAF4O95104 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SCAF4O95104 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAF4O95104 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.54■□□□□ 0.24
SCAF4O95104 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAF4O95104 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SCAF4O95104 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SCAF4O95104 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.54■□□□□ 0.24
SCAF4O95104 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
SCAF4O95104 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
SCAF4O95104 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCAF4O95104 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
SCAF4O95104 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCAF4O95104 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAF4O95104 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAF4O95104 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SCAF4O95104 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SCAF4O95104 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAF4O95104 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAF4O95104 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCAF4O95104 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.54■□□□□ 0.24
SCAF4O95104 AL162377.1-201ENST00000618844 1793 ntBASIC16.54■□□□□ 0.24
SCAF4O95104 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCAF4O95104 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCAF4O95104 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SCAF4O95104 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SCAF4O95104 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SCAF4O95104 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms