Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PTCD1O75127 PRKY-204ENST00000533551 1019 ntBASIC26.22■■□□□ 1.79
PTCD1O75127 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC26.22■■□□□ 1.79
PTCD1O75127 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PTCD1O75127 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC26.22■■□□□ 1.79
PTCD1O75127 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PTCD1O75127 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PTCD1O75127 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PTCD1O75127 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.22■■□□□ 1.79
PTCD1O75127 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PTCD1O75127 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PTCD1O75127 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
PTCD1O75127 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PTCD1O75127 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
PTCD1O75127 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC26.21■■□□□ 1.79
PTCD1O75127 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC26.21■■□□□ 1.79
PTCD1O75127 HES2-206ENST00000489730 730 ntTSL 2 BASIC26.21■■□□□ 1.79
PTCD1O75127 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26.21■■□□□ 1.79
PTCD1O75127 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC26.21■■□□□ 1.79
PTCD1O75127 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PTCD1O75127 CABP2-204ENST00000636477 941 ntTSL 5 BASIC26.21■■□□□ 1.79
PTCD1O75127 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PTCD1O75127 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
PTCD1O75127 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PTCD1O75127 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC26.2■■□□□ 1.78
PTCD1O75127 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTCD1O75127 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.2■■□□□ 1.78
PTCD1O75127 MIR4785-201ENST00000585005 73 ntBASIC26.2■■□□□ 1.78
PTCD1O75127 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC26.2■■□□□ 1.78
PTCD1O75127 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
PTCD1O75127 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTCD1O75127 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.2■■□□□ 1.78
PTCD1O75127 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.78
PTCD1O75127 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PTCD1O75127 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
PTCD1O75127 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PTCD1O75127 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PTCD1O75127 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.19■■□□□ 1.78
PTCD1O75127 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PTCD1O75127 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PTCD1O75127 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PTCD1O75127 PENK-204ENST00000518770 863 ntTSL 2 BASIC26.19■■□□□ 1.78
PTCD1O75127 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC26.19■■□□□ 1.78
PTCD1O75127 AL355075.4-201ENST00000554988 638 ntBASIC26.19■■□□□ 1.78
PTCD1O75127 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.19■■□□□ 1.78
PTCD1O75127 RARRES2P10-201ENST00000564312 460 ntBASIC26.19■■□□□ 1.78
PTCD1O75127 AC133561.5-201ENST00000635547 218 ntBASIC26.19■■□□□ 1.78
PTCD1O75127 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PTCD1O75127 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PTCD1O75127 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PTCD1O75127 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC26.18■■□□□ 1.78
PTCD1O75127 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PTCD1O75127 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.18■■□□□ 1.78
PTCD1O75127 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
PTCD1O75127 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PTCD1O75127 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PTCD1O75127 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PTCD1O75127 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PTCD1O75127 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
PTCD1O75127 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC26.18■■□□□ 1.78
PTCD1O75127 AC087499.1-201ENST00000418141 1075 ntBASIC26.18■■□□□ 1.78
PTCD1O75127 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC26.18■■□□□ 1.78
PTCD1O75127 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC26.18■■□□□ 1.78
PTCD1O75127 AC010331.1-201ENST00000611423 582 ntBASIC26.18■■□□□ 1.78
PTCD1O75127 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC26.18■■□□□ 1.78
PTCD1O75127 AC011484.1-201ENST00000377652 1995 ntBASIC26.18■■□□□ 1.78
PTCD1O75127 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PTCD1O75127 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC26.17■■□□□ 1.78
PTCD1O75127 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
PTCD1O75127 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
PTCD1O75127 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
PTCD1O75127 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PTCD1O75127 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC26.17■■□□□ 1.78
PTCD1O75127 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.17■■□□□ 1.78
PTCD1O75127 AC124283.5-201ENST00000624661 1809 ntBASIC26.17■■□□□ 1.78
PTCD1O75127 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PTCD1O75127 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PTCD1O75127 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC26.17■■□□□ 1.78
PTCD1O75127 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PTCD1O75127 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PTCD1O75127 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PTCD1O75127 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC26.17■■□□□ 1.78
PTCD1O75127 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.17■■□□□ 1.78
PTCD1O75127 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC26.17■■□□□ 1.78
PTCD1O75127 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC26.17■■□□□ 1.78
PTCD1O75127 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PTCD1O75127 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PTCD1O75127 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PTCD1O75127 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.17■■□□□ 1.78
PTCD1O75127 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.17■■□□□ 1.78
PTCD1O75127 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PTCD1O75127 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PTCD1O75127 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PTCD1O75127 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PTCD1O75127 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC26.16■■□□□ 1.78
PTCD1O75127 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
PTCD1O75127 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC26.16■■□□□ 1.78
PTCD1O75127 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PTCD1O75127 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC26.16■■□□□ 1.78
PTCD1O75127 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms