Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.23■□□□□ 0.51
PFDN1O60925 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PFDN1O60925 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PFDN1O60925 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PFDN1O60925 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
PFDN1O60925 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PFDN1O60925 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN1O60925 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.22■□□□□ 0.51
PFDN1O60925 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.22■□□□□ 0.51
PFDN1O60925 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PFDN1O60925 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN1O60925 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.22■□□□□ 0.51
PFDN1O60925 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.22■□□□□ 0.51
PFDN1O60925 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PFDN1O60925 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN1O60925 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN1O60925 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN1O60925 AC125437.2-201ENST00000625180 2167 ntBASIC18.22■□□□□ 0.51
PFDN1O60925 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.22■□□□□ 0.51
PFDN1O60925 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN1O60925 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 PLK5-205ENST00000642079 1969 ntBASIC18.21■□□□□ 0.51
PFDN1O60925 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PFDN1O60925 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PFDN1O60925 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 SUZ12P1-203ENST00000578195 985 ntBASIC18.21■□□□□ 0.51
PFDN1O60925 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.21■□□□□ 0.51
PFDN1O60925 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PFDN1O60925 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN1O60925 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
PFDN1O60925 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PFDN1O60925 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PFDN1O60925 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PFDN1O60925 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.2■□□□□ 0.5
PFDN1O60925 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PFDN1O60925 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 AC026471.6-201ENST00000622954 1905 ntBASIC18.2■□□□□ 0.5
PFDN1O60925 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PFDN1O60925 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PFDN1O60925 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PFDN1O60925 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PFDN1O60925 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.19■□□□□ 0.5
PFDN1O60925 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 C17orf82-201ENST00000623772 1530 ntBASIC18.19■□□□□ 0.5
PFDN1O60925 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.19■□□□□ 0.5
PFDN1O60925 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.19■□□□□ 0.5
PFDN1O60925 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
PFDN1O60925 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PFDN1O60925 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.19■□□□□ 0.5
PFDN1O60925 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PFDN1O60925 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.19■□□□□ 0.5
PFDN1O60925 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.19■□□□□ 0.5
PFDN1O60925 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms