Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PCDHGA12O60330 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
PCDHGA12O60330 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA12O60330 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA12O60330 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA12O60330 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGA12O60330 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA12O60330 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA12O60330 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA12O60330 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA12O60330 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA12O60330 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHGA12O60330 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA12O60330 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGA12O60330 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDHGA12O60330 AC010542.4-201ENST00000563151 1910 ntBASIC20.14■□□□□ 0.81
PCDHGA12O60330 AC026471.6-201ENST00000622954 1905 ntBASIC20.14■□□□□ 0.81
PCDHGA12O60330 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA12O60330 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGA12O60330 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA12O60330 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA12O60330 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGA12O60330 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PCDHGA12O60330 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 AC012618.2-201ENST00000428058 849 ntBASIC20.13■□□□□ 0.81
PCDHGA12O60330 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGA12O60330 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PCDHGA12O60330 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA12O60330 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGA12O60330 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGA12O60330 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 REXO1L12P-201ENST00000622156 912 ntBASIC20.12■□□□□ 0.81
PCDHGA12O60330 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGA12O60330 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHGA12O60330 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA12O60330 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA12O60330 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGA12O60330 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA12O60330 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGA12O60330 ECEL1P3-201ENST00000427961 737 ntBASIC20.11■□□□□ 0.81
PCDHGA12O60330 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGA12O60330 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDHGA12O60330 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDHGA12O60330 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGA12O60330 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHGA12O60330 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGA12O60330 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms