Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
KCNQ3O43525 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC26.24■■□□□ 1.79
KCNQ3O43525 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNQ3O43525 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC26.24■■□□□ 1.79
KCNQ3O43525 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNQ3O43525 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.24■■□□□ 1.79
KCNQ3O43525 HES2-206ENST00000489730 730 ntTSL 2 BASIC26.24■■□□□ 1.79
KCNQ3O43525 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.24■■□□□ 1.79
KCNQ3O43525 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.24■■□□□ 1.79
KCNQ3O43525 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC26.24■■□□□ 1.79
KCNQ3O43525 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNQ3O43525 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.24■■□□□ 1.79
KCNQ3O43525 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
KCNQ3O43525 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC26.24■■□□□ 1.79
KCNQ3O43525 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.24■■□□□ 1.79
KCNQ3O43525 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
KCNQ3O43525 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.23■■□□□ 1.79
KCNQ3O43525 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNQ3O43525 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.23■■□□□ 1.79
KCNQ3O43525 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC26.23■■□□□ 1.79
KCNQ3O43525 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
KCNQ3O43525 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
KCNQ3O43525 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
KCNQ3O43525 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
KCNQ3O43525 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNQ3O43525 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
KCNQ3O43525 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC26.23■■□□□ 1.79
KCNQ3O43525 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
KCNQ3O43525 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
KCNQ3O43525 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
KCNQ3O43525 PLK5-205ENST00000642079 1969 ntBASIC26.23■■□□□ 1.79
KCNQ3O43525 LINC00565-201ENST00000562710 2331 ntBASIC26.23■■□□□ 1.79
KCNQ3O43525 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNQ3O43525 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNQ3O43525 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNQ3O43525 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNQ3O43525 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNQ3O43525 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KCNQ3O43525 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
KCNQ3O43525 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
KCNQ3O43525 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
KCNQ3O43525 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
KCNQ3O43525 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
KCNQ3O43525 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
KCNQ3O43525 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.22■■□□□ 1.79
KCNQ3O43525 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
KCNQ3O43525 LY6E-205ENST00000519611 635 ntTSL 3 BASIC26.22■■□□□ 1.79
KCNQ3O43525 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC26.22■■□□□ 1.79
KCNQ3O43525 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC26.22■■□□□ 1.79
KCNQ3O43525 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
KCNQ3O43525 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26.22■■□□□ 1.79
KCNQ3O43525 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
KCNQ3O43525 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
KCNQ3O43525 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC26.21■■□□□ 1.79
KCNQ3O43525 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
KCNQ3O43525 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC26.21■■□□□ 1.79
KCNQ3O43525 AC124016.1-201ENST00000609552 612 ntBASIC26.21■■□□□ 1.79
KCNQ3O43525 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
KCNQ3O43525 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
KCNQ3O43525 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
KCNQ3O43525 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
KCNQ3O43525 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC26.2■■□□□ 1.79
KCNQ3O43525 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.2■■□□□ 1.79
KCNQ3O43525 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC26.2■■□□□ 1.78
KCNQ3O43525 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.2■■□□□ 1.78
KCNQ3O43525 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
KCNQ3O43525 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC26.2■■□□□ 1.78
KCNQ3O43525 AL121603.2-201ENST00000557373 2117 ntBASIC26.2■■□□□ 1.78
KCNQ3O43525 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC26.19■■□□□ 1.78
KCNQ3O43525 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC26.19■■□□□ 1.78
KCNQ3O43525 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
KCNQ3O43525 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
KCNQ3O43525 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
KCNQ3O43525 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
KCNQ3O43525 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26.19■■□□□ 1.78
KCNQ3O43525 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
KCNQ3O43525 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
KCNQ3O43525 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
KCNQ3O43525 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
KCNQ3O43525 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.19■■□□□ 1.78
KCNQ3O43525 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
KCNQ3O43525 AC124283.5-201ENST00000624661 1809 ntBASIC26.18■■□□□ 1.78
KCNQ3O43525 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KCNQ3O43525 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KCNQ3O43525 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
KCNQ3O43525 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
KCNQ3O43525 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.18■■□□□ 1.78
KCNQ3O43525 REXO2-216ENST00000544196 452 ntTSL 3 BASIC26.18■■□□□ 1.78
KCNQ3O43525 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KCNQ3O43525 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
KCNQ3O43525 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
KCNQ3O43525 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KCNQ3O43525 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
KCNQ3O43525 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KCNQ3O43525 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KCNQ3O43525 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KCNQ3O43525 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
KCNQ3O43525 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.17■■□□□ 1.78
KCNQ3O43525 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KCNQ3O43525 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms