Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SURF4O15260 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.32■□□□□ 0.52
SURF4O15260 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.32■□□□□ 0.52
SURF4O15260 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SURF4O15260 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SURF4O15260 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SURF4O15260 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SURF4O15260 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.32■□□□□ 0.52
SURF4O15260 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SURF4O15260 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SURF4O15260 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SURF4O15260 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SURF4O15260 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SURF4O15260 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.31■□□□□ 0.52
SURF4O15260 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SURF4O15260 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SURF4O15260 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.31■□□□□ 0.52
SURF4O15260 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SURF4O15260 AC010141.2-201ENST00000452426 721 ntBASIC18.31■□□□□ 0.52
SURF4O15260 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SURF4O15260 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.31■□□□□ 0.52
SURF4O15260 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SURF4O15260 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.31■□□□□ 0.52
SURF4O15260 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.31■□□□□ 0.52
SURF4O15260 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.31■□□□□ 0.52
SURF4O15260 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SURF4O15260 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SURF4O15260 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SURF4O15260 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.31■□□□□ 0.52
SURF4O15260 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SURF4O15260 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SURF4O15260 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SURF4O15260 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SURF4O15260 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SURF4O15260 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SURF4O15260 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SURF4O15260 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SURF4O15260 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SURF4O15260 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SURF4O15260 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SURF4O15260 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SURF4O15260 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SURF4O15260 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SURF4O15260 AC123595.1-201ENST00000440769 1046 ntBASIC18.3■□□□□ 0.52
SURF4O15260 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SURF4O15260 YBX1P1-201ENST00000445822 960 ntBASIC18.3■□□□□ 0.52
SURF4O15260 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SURF4O15260 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.3■□□□□ 0.52
SURF4O15260 MIR6084-201ENST00000622012 110 ntBASIC18.3■□□□□ 0.52
SURF4O15260 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SURF4O15260 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SURF4O15260 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.3■□□□□ 0.52
SURF4O15260 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SURF4O15260 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SURF4O15260 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SURF4O15260 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SURF4O15260 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SURF4O15260 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.3■□□□□ 0.52
SURF4O15260 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SURF4O15260 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SURF4O15260 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SURF4O15260 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
SURF4O15260 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SURF4O15260 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.29■□□□□ 0.52
SURF4O15260 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SURF4O15260 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.29■□□□□ 0.52
SURF4O15260 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SURF4O15260 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
SURF4O15260 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SURF4O15260 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.28■□□□□ 0.52
SURF4O15260 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.28■□□□□ 0.52
SURF4O15260 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SURF4O15260 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.28■□□□□ 0.52
SURF4O15260 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SURF4O15260 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.28■□□□□ 0.52
SURF4O15260 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SURF4O15260 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SURF4O15260 AC116562.4-201ENST00000641316 2276 ntBASIC18.28■□□□□ 0.52
SURF4O15260 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SURF4O15260 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
SURF4O15260 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SURF4O15260 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.28■□□□□ 0.52
SURF4O15260 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.28■□□□□ 0.52
SURF4O15260 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.28■□□□□ 0.52
SURF4O15260 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SURF4O15260 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms