Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH17O14917 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDH17O14917 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDH17O14917 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH17O14917 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH17O14917 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH17O14917 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH17O14917 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
PCDH17O14917 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDH17O14917 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH17O14917 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PCDH17O14917 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PCDH17O14917 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH17O14917 BX276092.2-201ENST00000417668 665 ntBASIC19.36■□□□□ 0.69
PCDH17O14917 TSPY20P-201ENST00000450910 630 ntBASIC19.36■□□□□ 0.69
PCDH17O14917 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDH17O14917 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDH17O14917 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.36■□□□□ 0.69
PCDH17O14917 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH17O14917 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH17O14917 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH17O14917 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDH17O14917 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDH17O14917 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDH17O14917 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH17O14917 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDH17O14917 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH17O14917 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDH17O14917 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH17O14917 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PCDH17O14917 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH17O14917 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDH17O14917 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
PCDH17O14917 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PCDH17O14917 MCRIP2P1-201ENST00000394346 511 ntBASIC19.35■□□□□ 0.69
PCDH17O14917 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDH17O14917 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.35■□□□□ 0.69
PCDH17O14917 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDH17O14917 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PCDH17O14917 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH17O14917 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH17O14917 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH17O14917 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH17O14917 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
PCDH17O14917 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH17O14917 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH17O14917 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDH17O14917 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH17O14917 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH17O14917 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH17O14917 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDH17O14917 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH17O14917 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
PCDH17O14917 AC097658.1-201ENST00000475555 843 ntBASIC19.34■□□□□ 0.69
PCDH17O14917 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDH17O14917 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH17O14917 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDH17O14917 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH17O14917 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH17O14917 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDH17O14917 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH17O14917 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH17O14917 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH17O14917 AC116050.2-201ENST00000612102 1779 ntBASIC19.34■□□□□ 0.69
PCDH17O14917 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDH17O14917 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH17O14917 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH17O14917 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH17O14917 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH17O14917 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH17O14917 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH17O14917 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH17O14917 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH17O14917 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH17O14917 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH17O14917 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDH17O14917 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDH17O14917 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDH17O14917 PLK5-205ENST00000642079 1969 ntBASIC19.33■□□□□ 0.68
PCDH17O14917 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PCDH17O14917 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PCDH17O14917 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PCDH17O14917 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH17O14917 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCDH17O14917 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PCDH17O14917 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 LSM12P1-201ENST00000411836 588 ntBASIC19.32■□□□□ 0.68
PCDH17O14917 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.32■□□□□ 0.68
PCDH17O14917 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDH17O14917 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH17O14917 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH17O14917 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PCDH17O14917 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms