Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDX4O14627 SLC25A3P1-201ENST00000443844 931 ntBASIC19.75■□□□□ 0.75
CDX4O14627 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDX4O14627 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDX4O14627 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDX4O14627 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CDX4O14627 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.75■□□□□ 0.75
CDX4O14627 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDX4O14627 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CDX4O14627 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.75■□□□□ 0.75
CDX4O14627 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CDX4O14627 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CDX4O14627 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CDX4O14627 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDX4O14627 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDX4O14627 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDX4O14627 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDX4O14627 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.74■□□□□ 0.75
CDX4O14627 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.74■□□□□ 0.75
CDX4O14627 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.74■□□□□ 0.75
CDX4O14627 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.74■□□□□ 0.75
CDX4O14627 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.74■□□□□ 0.75
CDX4O14627 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDX4O14627 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDX4O14627 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.74■□□□□ 0.75
CDX4O14627 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDX4O14627 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDX4O14627 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.74■□□□□ 0.75
CDX4O14627 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDX4O14627 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CDX4O14627 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDX4O14627 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDX4O14627 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDX4O14627 AC127496.7-201ENST00000625110 1798 ntBASIC19.73■□□□□ 0.75
CDX4O14627 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDX4O14627 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
CDX4O14627 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDX4O14627 AP002982.1-201ENST00000492365 877 ntBASIC19.73■□□□□ 0.75
CDX4O14627 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.73■□□□□ 0.75
CDX4O14627 AC116562.2-201ENST00000507042 360 ntBASIC19.73■□□□□ 0.75
CDX4O14627 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
CDX4O14627 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.73■□□□□ 0.75
CDX4O14627 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.73■□□□□ 0.75
CDX4O14627 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDX4O14627 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.73■□□□□ 0.75
CDX4O14627 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CDX4O14627 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDX4O14627 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDX4O14627 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CDX4O14627 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDX4O14627 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.73■□□□□ 0.75
CDX4O14627 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.73■□□□□ 0.75
CDX4O14627 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDX4O14627 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDX4O14627 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDX4O14627 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDX4O14627 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.72■□□□□ 0.75
CDX4O14627 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.72■□□□□ 0.75
CDX4O14627 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.72■□□□□ 0.75
CDX4O14627 AC087388.1-201ENST00000571370 1112 ntBASIC19.72■□□□□ 0.75
CDX4O14627 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDX4O14627 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDX4O14627 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDX4O14627 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDX4O14627 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDX4O14627 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.71■□□□□ 0.75
CDX4O14627 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.71■□□□□ 0.75
CDX4O14627 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDX4O14627 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDX4O14627 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.71■□□□□ 0.75
CDX4O14627 AC004264.1-201ENST00000608354 794 ntBASIC19.71■□□□□ 0.75
CDX4O14627 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CDX4O14627 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDX4O14627 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDX4O14627 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDX4O14627 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.71■□□□□ 0.75
CDX4O14627 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.71■□□□□ 0.75
CDX4O14627 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDX4O14627 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.71■□□□□ 0.75
CDX4O14627 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDX4O14627 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.7■□□□□ 0.74
CDX4O14627 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDX4O14627 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDX4O14627 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDX4O14627 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.7■□□□□ 0.74
CDX4O14627 AC023632.3-201ENST00000521633 145 ntBASIC19.7■□□□□ 0.74
CDX4O14627 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.7■□□□□ 0.74
CDX4O14627 WWOX-216ENST00000569818 525 ntBASIC19.7■□□□□ 0.74
CDX4O14627 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CDX4O14627 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDX4O14627 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.7■□□□□ 0.74
CDX4O14627 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDX4O14627 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.7■□□□□ 0.74
CDX4O14627 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CDX4O14627 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDX4O14627 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CDX4O14627 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDX4O14627 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDX4O14627 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDX4O14627 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms