Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC35.15■■■■□ 3.22
CUX2O14529 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC35.15■■■■□ 3.22
CUX2O14529 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC35.15■■■■□ 3.22
CUX2O14529 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC35.14■■■■□ 3.22
CUX2O14529 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
CUX2O14529 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC35.14■■■■□ 3.22
CUX2O14529 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC35.14■■■■□ 3.22
CUX2O14529 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC35.14■■■■□ 3.22
CUX2O14529 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
CUX2O14529 EGLN1P1-201ENST00000531623 762 ntBASIC35.14■■■■□ 3.22
CUX2O14529 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
CUX2O14529 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
CUX2O14529 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC35.13■■■■□ 3.22
CUX2O14529 AC139530.1-201ENST00000575312 1977 ntBASIC35.13■■■■□ 3.21
CUX2O14529 NBPF21P-201ENST00000425093 1451 ntBASIC35.13■■■■□ 3.21
CUX2O14529 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC35.13■■■■□ 3.21
CUX2O14529 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC35.13■■■■□ 3.21
CUX2O14529 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC35.13■■■■□ 3.21
CUX2O14529 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC35.13■■■■□ 3.21
CUX2O14529 PTPA-214ENST00000423100 988 ntTSL 2 BASIC35.13■■■■□ 3.21
CUX2O14529 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC35.13■■■■□ 3.21
CUX2O14529 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC35.13■■■■□ 3.21
CUX2O14529 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC35.13■■■■□ 3.21
CUX2O14529 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC35.13■■■■□ 3.21
CUX2O14529 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC35.13■■■■□ 3.21
CUX2O14529 AC069148.1-201ENST00000608741 768 ntBASIC35.13■■■■□ 3.21
CUX2O14529 FAM87A-204ENST00000613235 858 ntBASIC35.13■■■■□ 3.21
CUX2O14529 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC35.13■■■■□ 3.21
CUX2O14529 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
CUX2O14529 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
CUX2O14529 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
CUX2O14529 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC35.12■■■■□ 3.21
CUX2O14529 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
CUX2O14529 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC35.12■■■■□ 3.21
CUX2O14529 RNF152P1-201ENST00000397754 604 ntBASIC35.12■■■■□ 3.21
CUX2O14529 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC35.12■■■■□ 3.21
CUX2O14529 AP002982.1-201ENST00000492365 877 ntBASIC35.12■■■■□ 3.21
CUX2O14529 SLC25A1P4-201ENST00000567977 778 ntBASIC35.12■■■■□ 3.21
CUX2O14529 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC35.12■■■■□ 3.21
CUX2O14529 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC35.12■■■■□ 3.21
CUX2O14529 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC35.12■■■■□ 3.21
CUX2O14529 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC35.12■■■■□ 3.21
CUX2O14529 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
CUX2O14529 GCA-201ENST00000233612 1694 ntTSL 2 BASIC35.12■■■■□ 3.21
CUX2O14529 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC35.11■■■■□ 3.21
CUX2O14529 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC35.11■■■■□ 3.21
CUX2O14529 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC35.11■■■■□ 3.21
CUX2O14529 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC35.11■■■■□ 3.21
CUX2O14529 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
CUX2O14529 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
CUX2O14529 AL390719.1-204ENST00000412397 1219 ntBASIC35.1■■■■□ 3.21
CUX2O14529 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC35.1■■■■□ 3.21
CUX2O14529 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC35.1■■■■□ 3.21
CUX2O14529 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
CUX2O14529 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC35.1■■■■□ 3.21
CUX2O14529 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC35.09■■■■□ 3.21
CUX2O14529 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC35.09■■■■□ 3.21
CUX2O14529 AC116407.4-201ENST00000623319 1061 ntBASIC35.09■■■■□ 3.21
CUX2O14529 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CUX2O14529 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC35.09■■■■□ 3.21
CUX2O14529 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC35.09■■■■□ 3.21
CUX2O14529 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC35.09■■■■□ 3.21
CUX2O14529 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
CUX2O14529 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC35.09■■■■□ 3.21
CUX2O14529 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CUX2O14529 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC35.09■■■■□ 3.21
CUX2O14529 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC35.09■■■■□ 3.21
CUX2O14529 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC35.09■■■■□ 3.21
CUX2O14529 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC35.09■■■■□ 3.21
CUX2O14529 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC35.09■■■■□ 3.21
CUX2O14529 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CUX2O14529 GPX4-207ENST00000589115 812 ntTSL 2 BASIC35.09■■■■□ 3.21
CUX2O14529 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC35.09■■■■□ 3.21
CUX2O14529 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CUX2O14529 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC35.08■■■■□ 3.21
CUX2O14529 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CUX2O14529 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
CUX2O14529 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CUX2O14529 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CUX2O14529 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC35.08■■■■□ 3.21
CUX2O14529 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
CUX2O14529 CR769767.2-201ENST00000622735 460 ntBASIC35.08■■■■□ 3.21
CUX2O14529 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CUX2O14529 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC35.08■■■■□ 3.21
CUX2O14529 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC35.08■■■■□ 3.21
CUX2O14529 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC35.08■■■■□ 3.21
CUX2O14529 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
CUX2O14529 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CUX2O14529 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
CUX2O14529 AP005242.2-201ENST00000580065 1175 ntBASIC35.07■■■■□ 3.2
CUX2O14529 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
CUX2O14529 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC35.06■■■■□ 3.2
CUX2O14529 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC35.06■■■■□ 3.2
CUX2O14529 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC35.06■■■■□ 3.2
CUX2O14529 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
CUX2O14529 AC003102.1-202ENST00000563394 1796 ntBASIC35.06■■■■□ 3.2
CUX2O14529 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC35.05■■■■□ 3.2
CUX2O14529 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
CUX2O14529 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC35.05■■■■□ 3.2
CUX2O14529 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC35.05■■■■□ 3.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms