Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 KRT8P36-201ENST00000489121 1440 ntBASIC19.15■□□□□ 0.66
CLDN4O14493 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN4O14493 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN4O14493 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
CLDN4O14493 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN4O14493 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN4O14493 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN4O14493 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN4O14493 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN4O14493 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN4O14493 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN4O14493 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLDN4O14493 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CLDN4O14493 AC073210.2-201ENST00000430369 194 ntBASIC19.14■□□□□ 0.65
CLDN4O14493 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CLDN4O14493 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN4O14493 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.14■□□□□ 0.65
CLDN4O14493 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CLDN4O14493 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN4O14493 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.14■□□□□ 0.65
CLDN4O14493 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLDN4O14493 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN4O14493 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN4O14493 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN4O14493 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CLDN4O14493 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN4O14493 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN4O14493 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN4O14493 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN4O14493 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN4O14493 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.13■□□□□ 0.65
CLDN4O14493 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN4O14493 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.13■□□□□ 0.65
CLDN4O14493 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN4O14493 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CLDN4O14493 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN4O14493 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLDN4O14493 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN4O14493 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN4O14493 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.13■□□□□ 0.65
CLDN4O14493 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN4O14493 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN4O14493 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN4O14493 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CLDN4O14493 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN4O14493 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN4O14493 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN4O14493 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN4O14493 AC069152.1-201ENST00000438030 544 ntBASIC19.12■□□□□ 0.65
CLDN4O14493 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN4O14493 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.12■□□□□ 0.65
CLDN4O14493 AC097658.1-201ENST00000475555 843 ntBASIC19.12■□□□□ 0.65
CLDN4O14493 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.12■□□□□ 0.65
CLDN4O14493 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN4O14493 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN4O14493 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CLDN4O14493 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN4O14493 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CLDN4O14493 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN4O14493 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN4O14493 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN4O14493 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN4O14493 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN4O14493 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN4O14493 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN4O14493 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN4O14493 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN4O14493 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLDN4O14493 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN4O14493 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN4O14493 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN4O14493 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN4O14493 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLDN4O14493 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN4O14493 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN4O14493 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
CLDN4O14493 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN4O14493 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN4O14493 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN4O14493 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN4O14493 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN4O14493 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN4O14493 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CLDN4O14493 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN4O14493 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN4O14493 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CLDN4O14493 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.1■□□□□ 0.65
CLDN4O14493 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CLDN4O14493 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.1■□□□□ 0.65
CLDN4O14493 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.1■□□□□ 0.65
CLDN4O14493 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CLDN4O14493 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
CLDN4O14493 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CLDN4O14493 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
CLDN4O14493 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN4O14493 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN4O14493 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN4O14493 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN4O14493 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.09■□□□□ 0.65
CLDN4O14493 DUSP5P2-201ENST00000426873 1033 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms