Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM1O00151 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.28■□□□□ 0.68
PDLIM1O00151 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.28■□□□□ 0.68
PDLIM1O00151 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.28■□□□□ 0.68
PDLIM1O00151 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.28■□□□□ 0.68
PDLIM1O00151 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM1O00151 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
PDLIM1O00151 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.28■□□□□ 0.68
PDLIM1O00151 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.28■□□□□ 0.68
PDLIM1O00151 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM1O00151 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM1O00151 LTB4R2-202ENST00000528054 3092 ntBASIC19.28■□□□□ 0.68
PDLIM1O00151 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.28■□□□□ 0.68
PDLIM1O00151 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PDLIM1O00151 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.28■□□□□ 0.68
PDLIM1O00151 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
PDLIM1O00151 TSPY26P-201ENST00000476365 1326 ntBASIC19.27■□□□□ 0.68
PDLIM1O00151 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM1O00151 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM1O00151 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PDLIM1O00151 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM1O00151 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM1O00151 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.27■□□□□ 0.68
PDLIM1O00151 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.27■□□□□ 0.68
PDLIM1O00151 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM1O00151 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.27■□□□□ 0.68
PDLIM1O00151 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.27■□□□□ 0.68
PDLIM1O00151 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM1O00151 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PDLIM1O00151 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM1O00151 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM1O00151 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM1O00151 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDLIM1O00151 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.27■□□□□ 0.67
PDLIM1O00151 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDLIM1O00151 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PDLIM1O00151 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM1O00151 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDLIM1O00151 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM1O00151 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM1O00151 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.26■□□□□ 0.67
PDLIM1O00151 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.26■□□□□ 0.67
PDLIM1O00151 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM1O00151 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.26■□□□□ 0.67
PDLIM1O00151 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PDLIM1O00151 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM1O00151 NEFHP1-201ENST00000412845 2629 ntBASIC19.26■□□□□ 0.67
PDLIM1O00151 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM1O00151 AL032819.2-201ENST00000624543 2162 ntBASIC19.26■□□□□ 0.67
PDLIM1O00151 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM1O00151 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM1O00151 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.25■□□□□ 0.67
PDLIM1O00151 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.25■□□□□ 0.67
PDLIM1O00151 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDLIM1O00151 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.25■□□□□ 0.67
PDLIM1O00151 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PDLIM1O00151 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.25■□□□□ 0.67
PDLIM1O00151 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
PDLIM1O00151 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.25■□□□□ 0.67
PDLIM1O00151 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PDLIM1O00151 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM1O00151 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.25■□□□□ 0.67
PDLIM1O00151 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM1O00151 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.24■□□□□ 0.67
PDLIM1O00151 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM1O00151 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM1O00151 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM1O00151 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.24■□□□□ 0.67
PDLIM1O00151 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.24■□□□□ 0.67
PDLIM1O00151 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM1O00151 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM1O00151 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM1O00151 AP000974.1-201ENST00000623909 2387 ntBASIC19.24■□□□□ 0.67
PDLIM1O00151 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM1O00151 IRS3P-201ENST00000223076 1006 ntBASIC19.24■□□□□ 0.67
PDLIM1O00151 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM1O00151 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM1O00151 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.24■□□□□ 0.67
PDLIM1O00151 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.24■□□□□ 0.67
PDLIM1O00151 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms