Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 AP003097.1-201ENST00000530657 1135 ntBASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 AC093827.2-201ENST00000512654 315 ntBASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 AC060766.5-201ENST00000590539 871 ntBASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NPIPA2E9PIF3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 RPS2P52-201ENST00000469610 820 ntBASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 HLA-B-256ENST00000639848 1089 ntBASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.48■□□□□ 0.55
NPIPA2E9PIF3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 AL158047.1-201ENST00000445918 881 ntBASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 AC098590.1-201ENST00000468126 897 ntBASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
NPIPA2E9PIF3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 AC092368.3-202ENST00000574180 1591 ntBASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NPIPA2E9PIF3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms