Protein–RNA interactions for Protein: B4DXG7

cDNA FLJ57652, highly similar to Ephrin-A3, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B4DXG7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
B4DXG7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
B4DXG7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
B4DXG7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.81■□□□□ 0.6
B4DXG7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
B4DXG7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.81■□□□□ 0.6
B4DXG7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
B4DXG7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
B4DXG7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
B4DXG7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
B4DXG7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.8■□□□□ 0.6
B4DXG7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
B4DXG7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
B4DXG7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.8■□□□□ 0.6
B4DXG7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
B4DXG7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
B4DXG7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.8■□□□□ 0.6
B4DXG7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.8■□□□□ 0.6
B4DXG7 AC006970.2-201ENST00000450065 779 ntBASIC18.8■□□□□ 0.6
B4DXG7 AL162412.1-201ENST00000567129 965 ntBASIC18.8■□□□□ 0.6
B4DXG7 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.8■□□□□ 0.6
B4DXG7 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.8■□□□□ 0.6
B4DXG7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.8■□□□□ 0.6
B4DXG7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.8■□□□□ 0.6
B4DXG7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
B4DXG7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.8■□□□□ 0.6
B4DXG7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
B4DXG7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
B4DXG7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
B4DXG7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
B4DXG7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
B4DXG7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
B4DXG7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
B4DXG7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
B4DXG7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
B4DXG7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.79■□□□□ 0.6
B4DXG7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
B4DXG7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.79■□□□□ 0.6
B4DXG7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
B4DXG7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
B4DXG7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
B4DXG7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
B4DXG7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.79■□□□□ 0.6
B4DXG7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.79■□□□□ 0.6
B4DXG7 RARRES2P4-201ENST00000514074 484 ntBASIC18.79■□□□□ 0.6
B4DXG7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.79■□□□□ 0.6
B4DXG7 AC133552.2-202ENST00000575694 574 ntBASIC18.79■□□□□ 0.6
B4DXG7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.79■□□□□ 0.6
B4DXG7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
B4DXG7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
B4DXG7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
B4DXG7 AC116050.2-201ENST00000612102 1779 ntBASIC18.78■□□□□ 0.6
B4DXG7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
B4DXG7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
B4DXG7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
B4DXG7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
B4DXG7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
B4DXG7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
B4DXG7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
B4DXG7 HLA-L-209ENST00000420110 1011 ntBASIC18.78■□□□□ 0.6
B4DXG7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.78■□□□□ 0.6
B4DXG7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
B4DXG7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
B4DXG7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.78■□□□□ 0.6
B4DXG7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.78■□□□□ 0.6
B4DXG7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.78■□□□□ 0.6
B4DXG7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.78■□□□□ 0.6
B4DXG7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
B4DXG7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
B4DXG7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
B4DXG7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.78■□□□□ 0.6
B4DXG7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
B4DXG7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
B4DXG7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
B4DXG7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.77■□□□□ 0.6
B4DXG7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.77■□□□□ 0.6
B4DXG7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
B4DXG7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
B4DXG7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
B4DXG7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.77■□□□□ 0.6
B4DXG7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.77■□□□□ 0.6
B4DXG7 AC083906.2-201ENST00000511578 360 ntBASIC18.77■□□□□ 0.6
B4DXG7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.77■□□□□ 0.6
B4DXG7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.77■□□□□ 0.6
B4DXG7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
B4DXG7 AC104771.1-201ENST00000603335 964 ntBASIC18.77■□□□□ 0.6
B4DXG7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.77■□□□□ 0.6
B4DXG7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.77■□□□□ 0.6
B4DXG7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
B4DXG7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
B4DXG7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.76■□□□□ 0.59
B4DXG7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
B4DXG7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
B4DXG7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.76■□□□□ 0.59
B4DXG7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.76■□□□□ 0.59
B4DXG7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
B4DXG7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
B4DXG7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
B4DXG7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.76■□□□□ 0.59
B4DXG7 AC011484.1-201ENST00000377652 1995 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms