Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 RARRES2P11-201ENST00000635158 484 ntBASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.02■□□□□ 0.64
TCRBV3S1A0A5B6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.02■□□□□ 0.63
TCRBV3S1A0A5B6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TCRBV3S1A0A5B6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TCRBV3S1A0A5B6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
TCRBV3S1A0A5B6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TCRBV3S1A0A5B6 BX119927.1-201ENST00000636596 1552 ntBASIC19.02■□□□□ 0.63
TCRBV3S1A0A5B6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV3S1A0A5B6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 RARRES2P1-201ENST00000474487 481 ntBASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 NEFHP1-201ENST00000412845 2629 ntBASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19■□□□□ 0.63
TCRBV3S1A0A5B6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TCRBV3S1A0A5B6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 BX842568.3-201ENST00000418104 571 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms