Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 DUX4L13-201ENST00000554103 1267 ntBASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 AC021231.2-201ENST00000594613 730 ntBASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 DUX4L15-201ENST00000611059 1267 ntBASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 DUX4L23-201ENST00000615195 1269 ntBASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 DUX4L24-201ENST00000617576 1269 ntBASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 DUX4L22-201ENST00000618238 1269 ntBASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 DUX4L20-201ENST00000619712 1269 ntBASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 DUX4L21-201ENST00000622058 1269 ntBASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 DUX4L10-201ENST00000622460 1267 ntBASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 DUX4L25-201ENST00000624915 1269 ntBASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM238LA0A1B0GVL6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 SMPD5-203ENST00000639008 1464 ntBASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM238LA0A1B0GVL6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM238LA0A1B0GVL6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM238LA0A1B0GVL6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM238LA0A1B0GVL6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM238LA0A1B0GVL6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM238LA0A1B0GVL6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.21□□□□□ -0.14
TMEM238LA0A1B0GVL6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TMEM238LA0A1B0GVL6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM238LA0A1B0GVL6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TMEM238LA0A1B0GVL6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM238LA0A1B0GVL6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM238LA0A1B0GVL6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM238LA0A1B0GVL6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TMEM238LA0A1B0GVL6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TMEM238LA0A1B0GVL6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM238LA0A1B0GVL6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM238LA0A1B0GVL6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM238LA0A1B0GVL6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TMEM238LA0A1B0GVL6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.2□□□□□ -0.14
TMEM238LA0A1B0GVL6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM238LA0A1B0GVL6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms