Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 AL158211.5-201ENST00000623583 2518 ntBASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
TRBV4-1A0A0J9YWV2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 AC087289.5-201ENST00000586076 3175 ntBASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 DUX4L2-201ENST00000561772 1275 ntBASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 AC142381.2-201ENST00000566120 298 ntBASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 DUX4L6-201ENST00000626483 1275 ntBASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 DUX4L1-201ENST00000627662 1275 ntBASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 DUX4L8-201ENST00000629013 1275 ntBASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 DUX4L3-201ENST00000630187 1275 ntBASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 DUX4L7-201ENST00000630678 1275 ntBASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 DUX4L5-201ENST00000630834 1275 ntBASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 AC116562.4-201ENST00000641316 2276 ntBASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV4-1A0A0J9YWV2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 AP001160.3-201ENST00000601484 763 ntBASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV4-1A0A0J9YWV2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 AC027612.3-201ENST00000413684 1047 ntBASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 AL139246.5-201ENST00000606645 996 ntBASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV4-1A0A0J9YWV2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TRBV4-1A0A0J9YWV2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
TRBV4-1A0A0J9YWV2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV4-1A0A0J9YWV2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TRBV4-1A0A0J9YWV2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TRBV4-1A0A0J9YWV2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.58■□□□□ 0.57
TRBV4-1A0A0J9YWV2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.58■□□□□ 0.57
TRBV4-1A0A0J9YWV2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
TRBV4-1A0A0J9YWV2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV4-1A0A0J9YWV2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 KRT8P36-201ENST00000489121 1440 ntBASIC18.57■□□□□ 0.56
TRBV4-1A0A0J9YWV2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms