Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 AC005224.4-201ENST00000583262 1652 ntBASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV13-1A0A0B4J241 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV13-1A0A0B4J241 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 AC008764.7-201ENST00000593779 1081 ntBASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 AC011484.1-201ENST00000377652 1995 ntBASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV13-1A0A0B4J241 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 BX005040.4-201ENST00000637145 1518 ntBASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 AL136162.1-201ENST00000607711 1078 ntBASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 AP004607.4-201ENST00000530158 1459 ntBASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV13-1A0A0B4J241 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms