Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 KRT18P68-201ENST00000392293 1000 ntBASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 CD99P1-205ENST00000527459 561 ntBASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MIR4758-201ENST00000577688 71 ntBASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 FEM1AP1-201ENST00000431297 1995 ntBASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 KRT18P6-201ENST00000555540 1265 ntBASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
TNFSF12-TNFSF13A0A0A6YY99 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AL355472.2-201ENST00000422958 438 ntBASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TNFSF12-TNFSF13A0A0A6YY99 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms