Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.17■□□□□ 0.661e-6■■□□□ 13.4
PRPF8Q6P2Q9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.17■□□□□ 0.661e-6■■□□□ 13.4
PRPF8Q6P2Q9 IKBKG-203ENST00000440286 960 ntTSL 518.74■□□□□ 0.591e-6■■□□□ 13.4
PRPF8Q6P2Q9 IKBKG-210ENST00000615186 488 ntTSL 517.84■□□□□ 0.451e-6■■□□□ 13.4
PRPF8Q6P2Q9 IKBKG-201ENST00000413620 892 ntTSL 517.47■□□□□ 0.391e-6■■□□□ 13.4
PRPF8Q6P2Q9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.361e-6■■□□□ 13.4
PRPF8Q6P2Q9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.241e-6■■□□□ 13.4
PRPF8Q6P2Q9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.061e-6■■□□□ 13.4
PRPF8Q6P2Q9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.02□□□□□ -0.011e-6■■□□□ 13.4
PRPF8Q6P2Q9 IKBKG-209ENST00000612051 1972 ntTSL 1 (best)14.62□□□□□ -0.071e-6■■□□□ 13.4
PRPF8Q6P2Q9 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC10.94□□□□□ -0.661e-6■■□□□ 13.4
PRPF8Q6P2Q9 IKBKG-202ENST00000422680 841 ntTSL 210.85□□□□□ -0.671e-6■■□□□ 13.4
PRPF8Q6P2Q9 IKBKG-213ENST00000617838 285 ntTSL 1 (best)9.13□□□□□ -0.951e-6■■□□□ 13.4
PRPF8Q6P2Q9 MAP2K2-208ENST00000599345 923 ntTSL 517.27■□□□□ 0.362e-8■■□□□ 13.4
PRPF8Q6P2Q9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.54□□□□□ -0.565e-7■■□□□ 13.4
PRPF8Q6P2Q9 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.75e-7■■□□□ 13.4
PRPF8Q6P2Q9 BRD1-204ENST00000438393 3051 ntTSL 210.64□□□□□ -0.715e-7■■□□□ 13.4
PRPF8Q6P2Q9 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.765e-7■■□□□ 13.4
PRPF8Q6P2Q9 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC9.78□□□□□ -0.845e-7■■□□□ 13.4
PRPF8Q6P2Q9 CHPT1-209ENST00000552329 580 ntTSL 44.34□□□□□ -1.724e-6■■□□□ 13.4
PRPF8Q6P2Q9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.138e-8■■□□□ 13.4
PRPF8Q6P2Q9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.55■□□□□ 0.088e-8■■□□□ 13.4
PRPF8Q6P2Q9 BAIAP2-206ENST00000570913 559 ntTSL 412.98□□□□□ -0.336e-7■■□□□ 13.4
PRPF8Q6P2Q9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.44□□□□□ -0.428e-8■■□□□ 13.4
PRPF8Q6P2Q9 SUMO3-206ENST00000479153 1736 ntTSL 210.9□□□□□ -0.668e-8■■□□□ 13.4
PRPF8Q6P2Q9 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.03□□□□□ -1.448e-8■■□□□ 13.4
PRPF8Q6P2Q9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.581e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.091e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.021e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.21□□□□□ -0.131e-6■■□□□ 13.4
PRPF8Q6P2Q9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.543e-7■■□□□ 13.4
PRPF8Q6P2Q9 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.693e-7■■□□□ 13.4
PRPF8Q6P2Q9 REC8-212ENST00000619469 2720 ntTSL 28.91□□□□□ -0.983e-7■■□□□ 13.4
PRPF8Q6P2Q9 PEPD-204ENST00000588328 581 ntTSL 311.71□□□□□ -0.531e-6■■□□□ 13.4
PRPF8Q6P2Q9 ATF6B-213ENST00000475705 561 ntTSL 210.86□□□□□ -0.674e-7■■□□□ 13.4
PRPF8Q6P2Q9 PEPD-213ENST00000609145 570 ntTSL 28.55□□□□□ -1.041e-6■■□□□ 13.4
PRPF8Q6P2Q9 PEPD-205ENST00000588719 484 ntTSL 37.9□□□□□ -1.151e-6■■□□□ 13.4
PRPF8Q6P2Q9 PEPD-208ENST00000590731 557 ntTSL 46.91□□□□□ -1.31e-6■■□□□ 13.4
PRPF8Q6P2Q9 MIB2-213ENST00000487053 3252 ntTSL 515.17■□□□□ 0.022e-11■■□□□ 13.4
PRPF8Q6P2Q9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.93□□□□□ -0.022e-11■■□□□ 13.4
PRPF8Q6P2Q9 MIB2-229ENST00000514234 2562 ntTSL 214.72□□□□□ -0.052e-11■■□□□ 13.4
PRPF8Q6P2Q9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.65□□□□□ -0.062e-11■■□□□ 13.4
PRPF8Q6P2Q9 MIB2-210ENST00000479659 4247 ntTSL 214.16□□□□□ -0.142e-11■■□□□ 13.4
PRPF8Q6P2Q9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.182e-11■■□□□ 13.4
PRPF8Q6P2Q9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.252e-11■■□□□ 13.4
PRPF8Q6P2Q9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.312e-11■■□□□ 13.4
PRPF8Q6P2Q9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.312e-11■■□□□ 13.4
PRPF8Q6P2Q9 MIB2-214ENST00000489635 3034 ntTSL 212.74□□□□□ -0.372e-11■■□□□ 13.4
PRPF8Q6P2Q9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.372e-11■■□□□ 13.4
PRPF8Q6P2Q9 MIB2-220ENST00000506488 2997 ntTSL 512.52□□□□□ -0.412e-11■■□□□ 13.4
PRPF8Q6P2Q9 MIB2-226ENST00000511502 3326 ntTSL 212.12□□□□□ -0.472e-11■■□□□ 13.4
PRPF8Q6P2Q9 KCTD13-201ENST00000308768 1685 ntTSL 217.35■□□□□ 0.374e-11■■□□□ 13.4
PRPF8Q6P2Q9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.024e-11■■□□□ 13.4
PRPF8Q6P2Q9 KCTD13-206ENST00000566842 1860 ntTSL 215.11■□□□□ 0.014e-11■■□□□ 13.4
PRPF8Q6P2Q9 KCTD13-203ENST00000563264 440 ntTSL 29.94□□□□□ -0.824e-11■■□□□ 13.4
PRPF8Q6P2Q9 KCTD13-209ENST00000568995 601 ntTSL 58.57□□□□□ -1.044e-11■■□□□ 13.4
PRPF8Q6P2Q9 PACS2-212ENST00000551743 1876 ntTSL 513.23□□□□□ -0.298e-7■■□□□ 13.4
PRPF8Q6P2Q9 STAG3L5P-201ENST00000414292 517 ntTSL 210.52□□□□□ -0.735e-10■■□□□ 13.4
PRPF8Q6P2Q9 STAG3L5P-202ENST00000422479 683 ntTSL 28.18□□□□□ -1.15e-10■■□□□ 13.4
PRPF8Q6P2Q9 SRRM2-203ENST00000570655 575 ntTSL 27.37□□□□□ -1.231e-23■■□□□ 13.4
PRPF8Q6P2Q9 SRRM2-214ENST00000573451 441 ntTSL 36.75□□□□□ -1.331e-23■■□□□ 13.4
PRPF8Q6P2Q9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.27■□□□□ 0.22e-8■■□□□ 13.4
PRPF8Q6P2Q9 FBXO31-204ENST00000565593 2717 ntTSL 515.03■□□□□ -02e-8■■□□□ 13.4
PRPF8Q6P2Q9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.082e-8■■□□□ 13.4
PRPF8Q6P2Q9 AP1G2-216ENST00000554982 716 ntTSL 410.55□□□□□ -0.721e-9■■□□□ 13.4
PRPF8Q6P2Q9 SIK3-207ENST00000465421 3459 ntTSL 24.95□□□□□ -1.622e-6■■□□□ 13.4
PRPF8Q6P2Q9 QRICH2-202ENST00000447564 1500 ntAPPRIS ALT2 TSL 513.26□□□□□ -0.299e-7■■□□□ 13.4
PRPF8Q6P2Q9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.389e-7■■□□□ 13.4
PRPF8Q6P2Q9 QRICH2-203ENST00000524722 2253 ntTSL 1 (best)10.72□□□□□ -0.699e-7■■□□□ 13.4
PRPF8Q6P2Q9 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.769e-7■■□□□ 13.4
PRPF8Q6P2Q9 ZC3H7A-208ENST00000572781 564 ntTSL 413.76□□□□□ -0.215e-9■■□□□ 13.4
PRPF8Q6P2Q9 ZNF317-204ENST00000590152 2312 ntTSL 27.28□□□□□ -1.242e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC40A1-202ENST00000418714 712 ntTSL 311.07□□□□□ -0.644e-6■■□□□ 13.4
PRPF8Q6P2Q9 SLC40A1-206ENST00000455320 592 ntTSL 39.61□□□□□ -0.874e-6■■□□□ 13.4
PRPF8Q6P2Q9 FBXO31-202ENST00000561664 305 ntTSL 512.44□□□□□ -0.426e-14■■□□□ 13.4
PRPF8Q6P2Q9 ALDH4A1-203ENST00000432718 844 ntTSL 313.67□□□□□ -0.222e-8■■□□□ 13.4
PRPF8Q6P2Q9 EEF1A1-205ENST00000455918 701 ntTSL 217.69■□□□□ 0.423e-9■■□□□ 13.4
PRPF8Q6P2Q9 RHAG-203ENST00000618248 1203 ntTSL 5 BASIC8.76□□□□□ -1.016e-7■■□□□ 13.4
PRPF8Q6P2Q9 RHAG-201ENST00000229810 1283 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.026e-7■■□□□ 13.4
PRPF8Q6P2Q9 RHAG-202ENST00000371175 1912 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.236e-7■■□□□ 13.4
PRPF8Q6P2Q9 LARP1-209ENST00000519194 529 ntTSL 25.48□□□□□ -1.535e-11■■□□□ 13.4
PRPF8Q6P2Q9 FBXO9-204ENST00000459845 452 ntTSL 53.89□□□□□ -1.793e-6■■□□□ 13.4
PRPF8Q6P2Q9 AP1G2-224ENST00000556741 353 ntTSL 29.5□□□□□ -0.893e-25■■□□□ 13.4
PRPF8Q6P2Q9 AP1G2-230ENST00000557162 561 ntTSL 48.99□□□□□ -0.978e-10■■□□□ 13.4
PRPF8Q6P2Q9 AP1G2-219ENST00000555789 318 ntTSL 37.67□□□□□ -1.183e-25■■□□□ 13.4
PRPF8Q6P2Q9 AP1G2-215ENST00000554977 569 ntTSL 47.54□□□□□ -1.28e-10■■□□□ 13.4
PRPF8Q6P2Q9 AP1G2-221ENST00000555974 349 ntTSL 36.88□□□□□ -1.313e-25■■□□□ 13.4
PRPF8Q6P2Q9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.79■■□□□ 1.082e-12■■□□□ 13.4
PRPF8Q6P2Q9 PTPRF-207ENST00000436724 2168 ntTSL 1 (best)16.78■□□□□ 0.282e-12■■□□□ 13.4
PRPF8Q6P2Q9 PTPRF-202ENST00000372405 1962 ntTSL 1 (best)11□□□□□ -0.652e-12■■□□□ 13.4
PRPF8Q6P2Q9 PTPRF-208ENST00000437607 788 ntTSL 1 (best)10.57□□□□□ -0.722e-12■■□□□ 13.4
PRPF8Q6P2Q9 POLE-222ENST00000545015 366 ntTSL 211.42□□□□□ -0.586e-8■■□□□ 13.4
PRPF8Q6P2Q9 RPS3-220ENST00000534555 387 ntTSL 314.02□□□□□ -0.172e-35■■□□□ 13.4
PRPF8Q6P2Q9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.08■□□□□ 0.974e-19■■□□□ 13.4
PRPF8Q6P2Q9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.522e-6■■□□□ 13.4
PRPF8Q6P2Q9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.91□□□□□ -0.182e-6■■□□□ 13.4
PRPF8Q6P2Q9 NAGLU-205ENST00000592454 582 ntTSL 213.69□□□□□ -0.222e-6■■□□□ 13.4
PRPF8Q6P2Q9 NAGLU-204ENST00000591587 1493 ntTSL 513.2□□□□□ -0.32e-6■■□□□ 13.4
PRPF8Q6P2Q9 BCCIP-204ENST00000463330 500 ntTSL 31.63□□□□□ -2.151e-7■■□□□ 13.4
PRPF8Q6P2Q9 TMEM106A-207ENST00000592649 639 ntTSL 412.7□□□□□ -0.383e-12■■□□□ 13.4
Retrieved 100 of 73,762 protein–RNA pairs in 1105.6 ms