Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC023818.2-201ENST00000623817 2304 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AP003086.1-201ENST00000513207 1642 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SNX18Q96RF0 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNX18Q96RF0 RNA5SP452-201ENST00000363004 119 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 RN7SKP22-201ENST00000365097 293 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SNX18Q96RF0 LRMDA-201ENST00000372499 899 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNX18Q96RF0 MIR25-201ENST00000384816 84 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 TRAV20-201ENST00000390448 406 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 MED28P1-201ENST00000399158 571 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 RN7SKP94-201ENST00000411044 284 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 KIF9-203ENST00000425452 640 ntTSL 3 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 PAICSP3-201ENST00000428007 1168 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC016723.1-202ENST00000436982 643 ntTSL 5 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AL031289.1-201ENST00000440100 471 ntTSL 3 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC011193.1-202ENST00000441287 323 ntTSL 3 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC020718.1-201ENST00000456031 556 ntTSL 4 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 SAP30L-AS1-204ENST00000524264 1039 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SNX18Q96RF0 WT1-AS-206ENST00000525436 1254 ntTSL 5 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AP005435.2-201ENST00000525489 590 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 OR1D4-201ENST00000525719 939 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC131934.1-201ENST00000527799 912 ntTSL 5 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 ZNF195-220ENST00000528796 881 ntTSL 5 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC025423.3-201ENST00000541551 469 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC089984.2-201ENST00000550293 1201 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 PCED1B-AS1-209ENST00000552269 673 ntTSL 2 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 OR7E105P-201ENST00000555893 993 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 OR1D5-201ENST00000575751 939 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC005838.2-201ENST00000584643 317 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC005779.1-201ENST00000591569 540 ntTSL 3 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 NDE1P2-201ENST00000605569 1105 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC244517.9-201ENST00000624102 434 ntTSL 3 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 MIR3150A-201ENST00000636546 80 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC136285.1-201ENST00000566092 1447 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC128688.2-201ENST00000563632 1937 ntBASIC7.83□□□□□ -1.16
SNX18Q96RF0 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNX18Q96RF0 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNX18Q96RF0 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC7.83□□□□□ -1.16
SNX18Q96RF0 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNX18Q96RF0 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
SNX18Q96RF0 AC012360.3-201ENST00000610036 3449 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 AL359922.2-201ENST00000581788 3017 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 AC092656.1-201ENST00000503243 2097 ntTSL 2 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 IGLV2-14-201ENST00000390312 402 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 EGFLAM-205ENST00000397210 1299 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 RPS7-204ENST00000407445 833 ntTSL 2 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 U3.33-201ENST00000408117 204 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 AC092810.3-201ENST00000416349 473 ntTSL 3 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 AL355863.1-201ENST00000424331 293 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 WBP1LP7-201ENST00000437905 363 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 AP000350.3-201ENST00000440099 289 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 PCBP1-AS1-233ENST00000442326 668 ntTSL 3 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 SNX18P4-201ENST00000456554 838 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 AC092943.1-201ENST00000485389 878 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 OR2A7-201ENST00000493325 1116 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 LINC02222-201ENST00000513535 1039 ntTSL 4 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 AC098827.1-201ENST00000514630 667 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 AC021001.1-201ENST00000518703 987 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 AC022730.3-201ENST00000521051 736 ntTSL 5 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 LINC01300-202ENST00000521073 796 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SNX18Q96RF0 PSMA3-AS1-211ENST00000556225 839 ntTSL 4 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 AC090164.1-201ENST00000560214 664 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 CDRT7-201ENST00000568256 767 ntTSL 3 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC7.82□□□□□ -1.16
SNX18Q96RF0 AC007336.2-201ENST00000611626 557 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 BSNDP3-201ENST00000617487 364 ntBASIC7.82□□□□□ -1.16
SNX18Q96RF0 Metazoa_SRP.132-201ENST00000619251 285 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms