Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC018638.4-201ENST00000465971 1150 ntBASIC8.85□□□□□ -0.99
SLC1A1P43005 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 ALG1L12P-201ENST00000515046 434 ntBASIC8.85□□□□□ -0.99
SLC1A1P43005 OR4A7P-201ENST00000531463 910 ntBASIC8.85□□□□□ -0.99
SLC1A1P43005 ACTR3C-205ENST00000539352 570 ntTSL 5 BASIC8.85□□□□□ -0.99
SLC1A1P43005 VPS29-203ENST00000546588 1059 ntTSL 3 BASIC8.85□□□□□ -0.99
SLC1A1P43005 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
SLC1A1P43005 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 LINC02191-201ENST00000568036 518 ntTSL 4 BASIC8.85□□□□□ -0.99
SLC1A1P43005 AC022884.1-201ENST00000578490 577 ntTSL 4 BASIC8.85□□□□□ -0.99
SLC1A1P43005 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC8.85□□□□□ -0.99
SLC1A1P43005 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC8.85□□□□□ -0.99
SLC1A1P43005 AL356458.1-201ENST00000604764 465 ntBASIC8.85□□□□□ -0.99
SLC1A1P43005 AC009309.1-201ENST00000610262 460 ntBASIC8.85□□□□□ -0.99
SLC1A1P43005 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC8.85□□□□□ -0.99
SLC1A1P43005 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC8.85□□□□□ -0.99
SLC1A1P43005 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.85□□□□□ -0.99
SLC1A1P43005 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
SLC1A1P43005 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 AC120114.2-201ENST00000567795 2272 ntBASIC8.85□□□□□ -0.99
SLC1A1P43005 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
SLC1A1P43005 NPSR1-202ENST00000360581 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC8.85□□□□□ -0.99
SLC1A1P43005 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
SLC1A1P43005 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
SLC1A1P43005 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC8.85□□□□□ -0.99
SLC1A1P43005 TP63-211ENST00000449992 1506 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC8.85□□□□□ -0.99
SLC1A1P43005 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
SLC1A1P43005 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.84□□□□□ -0.99
SLC1A1P43005 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
SLC1A1P43005 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SLC1A1P43005 AC098657.2-201ENST00000567886 1976 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC8.84□□□□□ -0.99
SLC1A1P43005 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SLC1A1P43005 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SLC1A1P43005 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SLC1A1P43005 OR1S1-202ENST00000641544 1474 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
SLC1A1P43005 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
SLC1A1P43005 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SLC1A1P43005 AC145207.5-201ENST00000582866 2682 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
SLC1A1P43005 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC8.84□□□□□ -0.99
SLC1A1P43005 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SLC1A1P43005 ARHGDIB-201ENST00000228945 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SLC1A1P43005 NEK10-203ENST00000383770 1257 ntTSL 5 BASIC8.84□□□□□ -0.99
SLC1A1P43005 CRYGS-202ENST00000392499 1132 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
SLC1A1P43005 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SLC1A1P43005 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC8.84□□□□□ -0.99
SLC1A1P43005 RN7SKP181-201ENST00000411188 316 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 RPS23P8-201ENST00000429775 330 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 AC011998.2-201ENST00000430884 473 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 THAP12P6-201ENST00000431978 2310 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 HNRNPA1P31-201ENST00000448627 970 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 HAUS6P3-201ENST00000456660 1107 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 RN7SL74P-201ENST00000464966 299 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 RN7SL401P-201ENST00000470065 298 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 CSTA-202ENST00000479204 821 ntTSL 2 BASIC8.84□□□□□ -0.99
SLC1A1P43005 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC8.84□□□□□ -0.99
SLC1A1P43005 SLC25A14P1-201ENST00000502867 901 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 AC103770.1-201ENST00000517884 833 ntTSL 3 BASIC8.84□□□□□ -0.99
SLC1A1P43005 IGHVII-30-1-201ENST00000522218 301 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 AP002812.5-201ENST00000530972 712 ntTSL 2 BASIC8.84□□□□□ -0.99
SLC1A1P43005 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SLC1A1P43005 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.84□□□□□ -0.99
SLC1A1P43005 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC8.84□□□□□ -0.99
SLC1A1P43005 AP006545.1-201ENST00000563059 911 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 AC009101.2-202ENST00000564851 490 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 ELOB-205ENST00000572954 331 ntTSL 2 BASIC8.84□□□□□ -0.99
SLC1A1P43005 RN7SL138P-201ENST00000577405 287 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 AC007952.7-201ENST00000583141 757 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 AC011465.1-201ENST00000599092 328 ntTSL 3 BASIC8.84□□□□□ -0.99
SLC1A1P43005 AC090950.1-201ENST00000604625 830 ntBASIC8.84□□□□□ -0.99
SLC1A1P43005 ARL17A-206ENST00000622488 524 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
SLC1A1P43005 ADD3-AS1-203ENST00000625954 472 ntTSL 3 BASIC8.84□□□□□ -0.99
SLC1A1P43005 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SLC1A1P43005 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC8.84□□□□□ -0.99
SLC1A1P43005 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.84□□□□□ -0.99
SLC1A1P43005 OR3A1-201ENST00000323404 1650 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
SLC1A1P43005 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC8.84□□□□□ -0.99
SLC1A1P43005 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.84□□□□□ -0.99
SLC1A1P43005 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
SLC1A1P43005 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.84□□□□□ -1
SLC1A1P43005 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
SLC1A1P43005 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
SLC1A1P43005 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SLC1A1P43005 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8.83□□□□□ -1
SLC1A1P43005 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC8.83□□□□□ -1
SLC1A1P43005 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SLC1A1P43005 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC8.83□□□□□ -1
SLC1A1P43005 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SLC1A1P43005 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.83□□□□□ -1
SLC1A1P43005 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8.83□□□□□ -1
SLC1A1P43005 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
SLC1A1P43005 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms