Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC112173.1-201ENST00000505876 327 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 AC005842.1-201ENST00000537149 678 ntTSL 3 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 ACTR3C-205ENST00000539352 570 ntTSL 5 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 AC063947.2-201ENST00000547000 1256 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 EIF4EBP1P1-201ENST00000557776 341 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 snoZ6.4-201ENST00000581669 55 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 AC007785.3-201ENST00000595955 544 ntTSL 5 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 AL109924.4-201ENST00000623089 670 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 AC124944.3-204ENST00000641191 150 ntBASIC7.88□□□□□ -1.15
SNX18Q96RF0 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 XIST-211ENST00000635841 1734 ntTSL 5 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.88□□□□□ -1.15
SNX18Q96RF0 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 LYZ-201ENST00000261267 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SNX18Q96RF0 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC090061.1-202ENST00000502102 1449 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 AL355974.1-201ENST00000618896 1708 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC008514.2-201ENST00000522096 1337 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 RNA5-8SP2-201ENST00000363564 152 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 TDRKH-AS1-201ENST00000389897 992 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 FTH1P3-201ENST00000394290 584 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 BRCC3-206ENST00000399042 954 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 RN7SKP139-201ENST00000410411 293 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 RPSAP21-201ENST00000414293 885 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 BCAS2P3-201ENST00000416374 767 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 CHCHD4P2-201ENST00000431135 420 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 Z97634.1-203ENST00000435229 471 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC092568.1-201ENST00000440950 1284 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 CRIP1P4-201ENST00000442565 229 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC092620.1-201ENST00000453636 680 ntTSL 3 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC099681.1-201ENST00000454777 552 ntTSL 4 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 RN7SL749P-201ENST00000460421 290 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC108114.1-201ENST00000477321 437 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 HNRNPA1P20-201ENST00000484852 955 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC128707.1-202ENST00000548963 693 ntTSL 5 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC011939.1-201ENST00000567680 964 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC003965.1-201ENST00000575693 667 ntTSL 3 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 RN7SL457P-201ENST00000578760 287 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC233702.4-201ENST00000581610 304 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 RN7SL847P-201ENST00000582819 270 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 ZNF527-204ENST00000587349 999 ntTSL 3 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC010359.1-201ENST00000602982 507 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 AP001425.1-202ENST00000605450 1063 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC009237.16-201ENST00000612987 506 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 AL109804.1-201ENST00000620777 562 ntTSL 5 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 BRCC3-210ENST00000630295 954 ntTSL 5 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 AL450332.1-203ENST00000638742 1268 ntTSL 5 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 RNASE9-207ENST00000555230 2668 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC019155.2-201ENST00000420224 1918 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 CDY4P-201ENST00000418290 1513 ntBASIC7.87□□□□□ -1.15
SNX18Q96RF0 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 TP63-211ENST00000449992 1506 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
SNX18Q96RF0 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SNX18Q96RF0 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
SNX18Q96RF0 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC7.86□□□□□ -1.15
SNX18Q96RF0 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SNX18Q96RF0 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SNX18Q96RF0 AC107398.3-201ENST00000562284 7000 ntBASIC7.86□□□□□ -1.15
SNX18Q96RF0 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC7.86□□□□□ -1.15
SNX18Q96RF0 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
SNX18Q96RF0 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
SNX18Q96RF0 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms