Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 TSPY6P-201ENST00000448518 926 ntBASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 AC104771.1-201ENST00000603335 964 ntBASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 AC100791.3-201ENST00000617619 330 ntBASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLCA3PQ9Y6N3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 AC010980.2-201ENST00000587099 1412 ntBASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.19■□□□□ 0.66
CLCA3PQ9Y6N3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 MCRIP2P1-201ENST00000394346 511 ntBASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCA3PQ9Y6N3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.17■□□□□ 0.66
CLCA3PQ9Y6N3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCA3PQ9Y6N3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
CLCA3PQ9Y6N3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms